Lifting scheme-based wavelet transform method for improved genomic classification and sequence analysis of Coronavirus

S Kar, M Ganguly, S Sen - Innovation and Emerging Technologies, 2023 - World Scientific
The paper proposes a lifting scheme-based wavelet transform clustering method as a better
alternative to traditional alignment-based virus genome classification and grou** …

[PDF][PDF] Analyzing Kinship in Severe Acute Respiratory Syndrome Coronavirus 2 DNA Sequences Based on Hierarchical and K-Means Clustering Methods Using …

E Banjarnahor, A Bustamam… - … Journal on Advanced …, 2022 - researchgate.net
Based on the World Health Organization data obtained in mid-April 2021, Coronavirus or
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has already infected …

Comparisons of classification methods for viral genomes and protein families using alignment-free vectorization

HH Huang, S Hao, S Alarcon, J Yang - Statistical Applications in …, 2018 - degruyter.com
In this paper, we propose a statistical classification method based on discriminant analysis
using the first and second moments of positions of each nucleotide of the genome …

Discrete wavelet packet transform based discriminant analysis for whole genome sequences

HH Huang, SB Girimurugan - Statistical applications in genetics and …, 2019 - degruyter.com
In recent years, alignment-free methods have been widely applied in comparing genome
sequences, as these methods compute efficiently and provide desirable phylogenetic …

Discriminant analysis and normalization methods for next-generation sequencing data

Y Zhou, J Wang, Y Zhao, T Tong - New Frontiers of Biostatistics and …, 2018 - Springer
Next-generation sequencing has become a powerful tool for gene expression analysis with
the development of high-throughput techniques. Discriminating which type of diseases a …

Wavelet Applied to the Classification of Bacterial Genomes

LM Ferreira, T Sáfadi, JL Ferreira - Brazilian Archives of Biology and …, 2022 - SciELO Brasil
The classifications resulting from phylogenetic analysis are essential tools for evolutionary
studies. Phylogenetic is more than a part of evolutionary biology because its underlying …

[CITARE][C] Hsin-Hsiung Huang

S MS - 2013 - University of Illinois at Chicago