Tackling the population genetics of clonal and partially clonal organisms

F Halkett, JC Simon, F Balloux - Trends in ecology & evolution, 2005 - cell.com
Many clonal organisms experience occasional events of sexual recombination, with
profound consequences for their population dynamics and evolutionary trajectories. With the …

Genomic plasticity of the human fungal pathogen Candida albicans

A Selmecki, A Forche, J Berman - Eukaryotic cell, 2010 - Am Soc Microbiol
The genomic plasticity of Candida albicans, a commensal and common opportunistic fungal
pathogen, continues to reveal unexpected surprises. Once thought to be asexual, we now …

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

G Butler, MD Rasmussen, MF Lin, MAS Santos… - Nature, 2009 - nature.com
Candida species are the most common cause of opportunistic fungal infection worldwide.
Here we report the genome sequences of six Candida species and compare these and …

The evolution of drug resistance in clinical isolates of Candida albicans

CB Ford, JM Funt, D Abbey, L Issi, C Guiducci… - elife, 2015 - elifesciences.org
Candida albicans is both a member of the healthy human microbiome and a major pathogen
in immunocompromised individuals. Infections are typically treated with azole inhibitors of …

The parasexual cycle in Candida albicans provides an alternative pathway to meiosis for the formation of recombinant strains

A Forche, K Alby, D Schaefer, AD Johnson… - PLoS …, 2008 - journals.plos.org
Candida albicans has an elaborate, yet efficient, mating system that promotes conjugation
between diploid a and α strains. The product of mating is a tetraploid a/α cell that must …

An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1

A Selmecki, M Gerami‐Nejad, C Paulson… - Molecular …, 2008 - Wiley Online Library
Acquired azole resistance is a serious clinical problem that is often associated with the
appearance of aneuploidy and, in particular, with the formation of an isochromosome [i (5L)] …

Evolution in Candida albicans Populations During a Single Passage Through a Mouse Host

A Forche, PT Magee, A Selmecki, J Berman, G May - Genetics, 2009 - academic.oup.com
The mechanisms and rates by which genotypic and phenotypic variation is generated in
opportunistic, eukaryotic pathogens during growth in hosts are not well understood. We …

Molecular Phylogenetics and Epidemiology of Candida Albicans

FC Odds - Future microbiology, 2010 - Taylor & Francis
Candida albicans, a diploid yeast commensal and opportunist pathogen, has evolved
unusual mechanisms for maintenance of genetic diversity in the absence of a complete …

Multilocus Sequence Ty** Reveals Intrafamilial Transmission and Microevolutions of Candida albicans Isolates from the Human Digestive Tract

ME Bougnoux, D Diogo, N Francois… - Journal of clinical …, 2006 - Am Soc Microbiol
Candida albicans is a human commensal that is also responsible for superficial and
systemic infections. Little is known about the carriage of C. albicans in the digestive tract and …

Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in Candida albicans

A Forche, G Cromie, AC Gerstein, NV Solis… - Genetics, 2018 - academic.oup.com
In vitro studies suggest that stress may generate random standing variation and that different
cellular and ploidy states may evolve more rapidly under stress. Yet this idea has not been …