[HTML][HTML] Neural network-based approaches for biomedical relation classification: a review

Y Zhang, H Lin, Z Yang, J Wang, Y Sun, B Xu… - Journal of biomedical …, 2019 - Elsevier
The explosive growth of biomedical literature has created a rich source of knowledge, such
as that on protein-protein interactions (PPIs) and drug-drug interactions (DDIs), locked in …

Exploring pre-trained language models for event extraction and generation

S Yang, D Feng, L Qiao, Z Kan, D Li - Proceedings of the 57th …, 2019 - aclanthology.org
Traditional approaches to the task of ACE event extraction usually depend on manually
annotated data, which is often laborious to create and limited in size. Therefore, in addition …

Entity-relation extraction as multi-turn question answering

X Li, F Yin, Z Sun, X Li, A Yuan, D Chai… - arxiv preprint arxiv …, 2019 - arxiv.org
In this paper, we propose a new paradigm for the task of entity-relation extraction. We cast
the task as a multi-turn question answering problem, ie, the extraction of entities and …

Biomedical relation extraction: from binary to complex

D Zhou, D Zhong, Y He - Computational and mathematical …, 2014 - Wiley Online Library
Biomedical relation extraction aims to uncover high‐quality relations from life science
literature with high accuracy and efficiency. Early biomedical relation extraction tasks …

UniRE: A unified label space for entity relation extraction

Y Wang, C Sun, Y Wu, H Zhou, L Li, J Yan - arxiv preprint arxiv …, 2021 - arxiv.org
Many joint entity relation extraction models setup two separated label spaces for the two sub-
tasks (ie, entity detection and relation classification). We argue that this setting may hinder …

[PDF][PDF] Modeling joint entity and relation extraction with table representation

M Miwa, Y Sasaki - Proceedings of the 2014 conference on …, 2014 - aclanthology.org
This paper proposes a history-based structured learning approach that jointly extracts
entities and relations in a sentence. We introduce a novel simple and flexible table …

Zero-shot transfer learning for event extraction

L Huang, H Ji, K Cho, CR Voss - arxiv preprint arxiv:1707.01066, 2017 - arxiv.org
Most previous event extraction studies have relied heavily on features derived from
annotated event mentions, thus cannot be applied to new event types without annotation …

End-to-end neural relation extraction with global optimization

M Zhang, Y Zhang, G Fu - Proceedings of the 2017 conference on …, 2017 - aclanthology.org
Neural networks have shown promising results for relation extraction. State-of-the-art
models cast the task as an end-to-end problem, solved incrementally using a local classifier …

Joint type inference on entities and relations via graph convolutional networks

C Sun, Y Gong, Y Wu, M Gong, D Jiang… - Proceedings of the …, 2019 - aclanthology.org
We develop a new paradigm for the task of joint entity relation extraction. It first identifies
entity spans, then performs a joint inference on entity types and relation types. To tackle the …

Multichannel convolutional neural network for biological relation extraction

C Quan, L Hua, X Sun, W Bai - BioMed research international, 2016 - Wiley Online Library
The plethora of biomedical relations which are embedded in medical logs (records)
demands researchers' attention. Previous theoretical and practical focuses were restricted …