A survey of vectorization methods in topological data analysis

D Ali, A Asaad, MJ Jimenez, V Nanda… - … on Pattern Analysis …, 2023 - ieeexplore.ieee.org
Attempts to incorporate topological information in supervised learning tasks have resulted in
the creation of several techniques for vectorizing persistent homology barcodes. In this …

[HTML][HTML] Advancing precision medicine: algebraic topology and differential geometry in radiology and computational pathology

RM Levenson, Y Singh, B Rieck, QA Hathaway… - Laboratory …, 2024 - Elsevier
Precision medicine aims to provide personalized care based on individual patient
characteristics, rather than guideline-directed therapies for groups of diseases or patient …

Deciphering the diversity and sequence of extracellular matrix and cellular spatial patterns in lung adenocarcinoma using topological data analysis

IHR Yoon, R Jenkins, E Colliver, H Zhang, D Novo… - bioRxiv, 2024 - biorxiv.org
Extracellular matrix (ECM) organization influences cancer development and progression. It
modulates the invasion of cancer cells and can hinder the access of immune cells to cancer …

Persistent Homology-Based Machine Learning Method for Filtering and Classifying Mammographic Microcalcification Images in Early Cancer Detection

AA Malek, MA Alias, FA Razak, MSM Noorani… - Cancers, 2023 - mdpi.com
Simple Summary The appearance of microcalcifications in mammogram images is an
essential predictor for radiologists to detect early-stage breast cancer. This study aims to …

Signatures, lipschitz-free spaces, and paths of persistence diagrams

C Giusti, D Lee - SIAM Journal on Applied Algebra and Geometry, 2023 - SIAM
Paths of persistence diagrams provide a summary of the dynamic topological structure of a
one-parameter family of metric spaces. These summaries can be used to study and …

Persistent Homology Identifies Pathways Associated with Hepatocellular Carcinoma from Peripheral Blood Samples

MS Abdullahi, A Suratanee, RM Piro, K Plaimas - Mathematics, 2024 - mdpi.com
Topological data analysis (TDA) methods have recently emerged as powerful tools for
uncovering intricate patterns and relationships in complex biological data, demonstrating …

[HTML][HTML] Persistent Homology Analysis of AI-Generated Fractal Patterns: A Mathematical Framework for Evaluating Geometric Authenticity

M Lee, S Lee - Fractal and Fractional, 2024 - mdpi.com
We present a mathematical framework for analyzing fractal patterns in AI-generated images
using persistent homology. Given a text-to-image map** M: T→ I, we demonstrate that the …

[HTML][HTML] Persistence Symmetric Kernels for Classification: A Comparative Study

C Bandiziol, S De Marchi - Symmetry, 2024 - mdpi.com
The aim of the present work is a comparative study of different persistence kernels applied to
various classification problems. After some necessary preliminaries on homology and …

Persistence kernels for classification: A comparative study

C Bandiziol, S De Marchi - arxiv preprint arxiv:2408.07090, 2024 - arxiv.org
The aim of the present work is a comparative study of different persistence kernels applied to
various classification problems. After some necessary preliminaries on homology and …

Improving Classification Performance of Spatial Filters in Mammographic Microcalcifications Images Using Persistent Homology

AA Malek, MA Alias, FA Razak… - Malaysian Journal of …, 2024 - mjfas.utm.my
Noise and artefacts in mammogram images can obscure important indicators of
microcalcifications, complicating accurate diagnosis. While traditional spatial filters can …