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Multi-omics data integration, interpretation, and its application
I Subramanian, S Verma, S Kumar… - … and biology insights, 2020 - journals.sagepub.com
To study complex biological processes holistically, it is imperative to take an integrative
approach that combines multi-omics data to highlight the interrelationships of the involved …
approach that combines multi-omics data to highlight the interrelationships of the involved …
Overcoming cancer therapeutic bottleneck by drug repurposing
Ever present hurdles for the discovery of new drugs for cancer therapy have necessitated
the development of the alternative strategy of drug repurposing, the development of old …
the development of the alternative strategy of drug repurposing, the development of old …
Large-scale public data reuse to model immunotherapy response and resistance
Despite growing numbers of immune checkpoint blockade (ICB) trials with available omics
data, it remains challenging to evaluate the robustness of ICB response and immune …
data, it remains challenging to evaluate the robustness of ICB response and immune …
Signatures of T cell dysfunction and exclusion predict cancer immunotherapy response
Cancer treatment by immune checkpoint blockade (ICB) can bring long-lasting clinical
benefits, but only a fraction of patients respond to treatment. To predict ICB response, we …
benefits, but only a fraction of patients respond to treatment. To predict ICB response, we …
LinkedOmics: analyzing multi-omics data within and across 32 cancer types
The LinkedOmics database contains multi-omics data and clinical data for 32 cancer types
and a total of 11 158 patients from The Cancer Genome Atlas (TCGA) project. It is also the …
and a total of 11 158 patients from The Cancer Genome Atlas (TCGA) project. It is also the …
GlioVis data portal for visualization and analysis of brain tumor expression datasets
We are currently living in the “genomic era.” In the last decade, high-throughput genomic
analyses have generated massive quantities of data that can be used to explore gene …
analyses have generated massive quantities of data that can be used to explore gene …
Unifying cancer and normal RNA sequencing data from different sources
Driven by the recent advances of next generation sequencing (NGS) technologies and an
urgent need to decode complex human diseases, a multitude of large-scale studies were …
urgent need to decode complex human diseases, a multitude of large-scale studies were …
Enhancing GTEx by bridging the gaps between genotype, gene expression, and disease
Nature genetics, 2017 - nature.com
Genetic variants have been associated with myriad molecular phenotypes that provide new
insight into the range of mechanisms underlying genetic traits and diseases. Identifying any …
insight into the range of mechanisms underlying genetic traits and diseases. Identifying any …
[HTML][HTML] Computational strategies for single-cell multi-omics integration
Single-cell omics technologies are currently solving biological and medical problems that
earlier have remained elusive, such as discovery of new cell types, cellular differentiation …
earlier have remained elusive, such as discovery of new cell types, cellular differentiation …
A single-nucleotide mutation within the TBX3 enhancer increased body size in Chinese horses
X Liu, Y Zhang, W Liu, Y Li, J Pan, Y Pu, J Han… - Current Biology, 2022 - cell.com
Chinese ponies are endemic to the mountainous areas of southwestern China and were first
reported in the archaeological record at the Royal Tomb of Zhongshan King, Mancheng …
reported in the archaeological record at the Royal Tomb of Zhongshan King, Mancheng …