[HTML][HTML] Systematic integration of structural and functional data into multi-scale models of mouse primary visual cortex

YN Billeh, B Cai, SL Gratiy, K Dai, R Iyer, NW Gouwens… - Neuron, 2020 - cell.com
Structural rules underlying functional properties of cortical circuits are poorly understood. To
explore these rules systematically, we integrated information from extensive literature …

Exploring phase–amplitude coupling from primary motor cortex-basal ganglia–thalamus network model

Y Yu, F Han, Q Wang - Neural Networks, 2022 - Elsevier
The purpose of this study is to develop a primary motor cortex (M1)-basal ganglia–thalamus
model capable of reproducing the physiological phenomenon of exaggerated phase …

Multiscale computer model of the spinal dorsal horn reveals changes in network processing associated with chronic pain

L Medlock, K Sekiguchi, S Hong… - Journal of …, 2022 - Soc Neuroscience
Pain-related sensory input is processed in the spinal dorsal horn (SDH) before being
relayed to the brain. That processing profoundly influences whether stimuli are correctly or …

Large-scale biophysically detailed model of somatosensory thalamocortical circuits in NetPyNE

FS Borges, JVS Moreira, LM Takarabe… - Frontiers in …, 2022 - frontiersin.org
The primary somatosensory cortex (S1) of mammals is critically important in the perception
of touch and related sensorimotor behaviors. In 2015, the Blue Brain Project (BBP) …

Optogenetic stimulation of primary motor cortex regulates beta oscillations in the basal ganglia: A Computational study

Y Yu, Y Fan, S Hou, Q Wang - Communications in Nonlinear Science and …, 2023 - Elsevier
The primary motor cortex (M1) contains interconnected and diverse layers that play an
important role in motor execution. In recent years, M1 has emerged as one of the hot targets …

Detecting spontaneous neural oscillation events in primate auditory cortex

SA Neymotin, I Tal, A Barczak, MN O'Connell… - Eneuro, 2022 - eneuro.org
Electrophysiological oscillations in the brain have been shown to occur as multicycle events,
with onset and offset dependent on behavioral and cognitive state. To provide a baseline for …

Effects of Ih and TASK-like shunting current on dendritic impedance in layer 5 pyramidal-tract neurons

C Kelley, S Dura-Bernal, SA Neymotin… - Journal of …, 2021 - journals.physiology.org
Pyramidal neurons in neocortex have complex input-output relationships that depend on
their morphologies, ion channel distributions, and the nature of their inputs, but which cannot …

Taxonomy of neural oscillation events in primate auditory cortex

SA Neymotin, I Tal, A Barczak, MN O'Connell… - bioRxiv, 2020 - biorxiv.org
Electrophysiological oscillations in the brain have been shown to occur as multi-cycle
events, with onset and offset dependent on behavioral and cognitive state. To provide a …

NetPyNE implementation and scaling of the Potjans-Diesmann cortical microcircuit model

C Romaro, FA Najman, WW Lytton, AC Roque… - Neural …, 2021 - direct.mit.edu
Abstract The Potjans-Diesmann cortical microcircuit model is a widely used model originally
implemented in NEST. Here, we reimplemented the model using NetPyNE, a high-level …

[PDF][PDF] Estimation of the cortical microconnectome from in vivo spiking activity in the macaque monkey

A Morales-Gregorio, P Dabrowska… - … Meeting CNS* 2020, 2020 - juser.fz-juelich.de
The primate brain is a complex system and many aspects of the relation between its cortical
structure and network activity remain to be understood. Bottom-up simulation approaches …