State of the art survey on MRI brain tumor segmentation

N Gordillo, E Montseny, P Sobrevilla - Magnetic resonance imaging, 2013 - Elsevier
Brain tumor segmentation consists of separating the different tumor tissues (solid or active
tumor, edema, and necrosis) from normal brain tissues: gray matter (GM), white matter (WM) …

Medical image segmentation by combining graph cuts and oriented active appearance models

X Chen, JK Udupa, U Bagci, Y Zhuge… - IEEE transactions on …, 2012 - ieeexplore.ieee.org
In this paper, we propose a novel method based on a strategic combination of the active
appearance model (AAM), live wire (LW), and graph cuts (GCs) for abdominal 3-D organ …

Segmenting and tracking fluorescent cells in dynamic 3-D microscopy with coupled active surfaces

A Dufour, V Shinin, S Tajbakhsh… - … on Image Processing, 2005 - ieeexplore.ieee.org
Cell migrations and deformations play essential roles in biological processes, such as
parasite invasion, immune response, embryonic development, and cancer. We describe a …

Segmentation and tracking of migrating cells in videomicroscopy with parametric active contours: A tool for cell-based drug testing

C Zimmer, E Labruyere, V Meas-Yedid… - IEEE transactions on …, 2002 - ieeexplore.ieee.org
This paper presents a segmentation and tracking method for quantitative analysis of cell
dynamics from in vitro videomicroscopy data. The method is based on parametric active …

On the digital trail of mobile cells

C Zimmer, B Zhang, A Dufour… - IEEE Signal …, 2006 - ieeexplore.ieee.org
Cell migration is a field of intense current research, where biologists increasingly rely on
methods and expertise from physics and engineering. Signal processing approaches can …

Liver and Spleen Volumetry with Quantitative MR Imaging and Dual-Space Clustering Segmentation1

SW Farraher, H Jara, KJ Chang, A Hou, JA Soto - Radiology, 2005 - pubs.rsna.org
The purpose of this HIPAA-compliant, institutional review board–approved study was to
assess the liver and spleen volumes calculated by using a semiautomated dual-space …

3D automatic anatomy segmentation based on iterative graph‐cut‐ASM

X Chen, U Bagci - Medical physics, 2011 - Wiley Online Library
Purpose: This paper studies the feasibility of develo** an automatic anatomy
segmentation (AAS) system in clinical radiology and demonstrates its operation on clinical …

Modeling of personalized anatomy using plastic strains

B Wang, G Matcuk, J Barbič - ACM Transactions on Graphics (TOG), 2021 - dl.acm.org
We present a method for modeling solid objects undergoing large spatially varying and/or
anisotropic strains, and use it to reconstruct human anatomy from medical images. Our novel …

Tracking cells in life cell imaging videos using topological alignments

A Mosig, S Jäger, C Wang, S Nath, I Ersoy… - Algorithms for Molecular …, 2009 - Springer
Background With the increasing availability of live cell imaging technology, tracking cells
and other moving objects in live cell videos has become a major challenge for bioimage …

Texture analysis of multimodal magnetic resonance images in support of diagnostic classification of childhood brain tumours

S Tantisatirapong - 2015 - etheses.bham.ac.uk
Primary brain tumours are recognised as the most common form of solid tumours in children,
with pilocytic astrocytoma, medulloblastoma and ependymoma being found most frequently …