Genome evolution in plants and the origins of innovation

JW Clark - New Phytologist, 2023 - Wiley Online Library
Plant evolution has been characterised by a series of major novelties in their vegetative and
reproductive traits that have led to greater complexity. Underpinning this diversification has …

Experimental evolution for cell biology

J Helsen, G Sherlock, G Dey - Trends in cell biology, 2023 - cell.com
Evolutionary cell biology explores the origins, principles, and core functions of cellular
features and regulatory networks through the lens of evolution. This emerging field relies …

Eukaryotic CD-NTase, STING, and viperin proteins evolved via domain shuffling, horizontal transfer, and ancient inheritance from prokaryotes

EM Culbertson, TC Levin - PLoS Biology, 2023 - journals.plos.org
Animals use a variety of cell-autonomous innate immune proteins to detect viral infections
and prevent replication. Recent studies have discovered that a subset of mammalian …

Comparative landscape of genetic dependencies in human and chimpanzee stem cells

R She, T Fair, NK Schaefer, RA Saunders, BJ Pavlovic… - Cell, 2023 - cell.com
Comparative studies of great apes provide a window into our evolutionary past, but the
extent and identity of cellular differences that emerged during hominin evolution remain …

The cell morphological diversity of Saccharomycotina yeasts

CM Chavez, M Groenewald, AB Hulfachor… - FEMS Yeast …, 2024 - academic.oup.com
The∼ 1 200 known species in subphylum Saccharomycotina are a highly diverse clade of
unicellular fungi. During its lifecycle, a typical yeast exhibits multiple cell types with various …

Deep Conservation and Unexpected Evolutionary History of Neighboring lncRNAs MALAT1 and NEAT1

F Weghorst, M Torres Marcén, G Faridi… - Journal of Molecular …, 2024 - Springer
Long non-coding RNAs (lncRNAs) have begun to receive overdue attention for their
regulatory roles in gene expression and other cellular processes. Although most lncRNAs …

Overexpression profiling reveals cellular requirements in the context of genetic backgrounds and environments

N Saeki, C Yamamoto, Y Eguchi, T Sekito… - PLoS …, 2023 - journals.plos.org
Overexpression can help life adapt to stressful environments, making an examination of
overexpressed genes valuable for understanding stress tolerance mechanisms. However, a …

Progressive transcriptomic shifts in evolved yeast strains following gene knockout

B Jiang, C **ao, L Liu - Iscience, 2024 - cell.com
Gene knockout disrupts cellular homeostasis, altering gene expression, and phenotypes.
We investigated whether cells return to their pre-knockout transcriptomic state through …

Eukaryotic antiviral immune proteins arose via convergence, horizontal transfer, and ancient inheritance

EM Culbertson, TC Levin - bioRxiv, 2023 - pmc.ncbi.nlm.nih.gov
Animals use a variety of cell-autonomous innate immune proteins to detect viral infections
and prevent replication. Recent studies have discovered that a subset of mammalian …

Kinase regulators evolved into two families by gain and loss of ability to bind plant steroid receptors

Q Wei, J Liu, F Guo, Z Wang, X Zhang, L Yuan… - Plant …, 2023 - academic.oup.com
All biological functions evolve by fixing beneficial mutations and removing deleterious ones.
Therefore, continuously fixing and removing the same essential function to separately …