Problems and cautions with sequence mismatch analysis and Bayesian skyline plots to infer historical demography

WS Grant - Journal of Heredity, 2015 - academic.oup.com
Sequence mismatch analysis (MMA) and Bayesian skyline plots (BSP) are commonly used
to reconstruct historical demography. A survey of 173 research articles (2009–2014), which …

Comparative phylogeography of the ocean planet

BW Bowen, MR Gaither, JD DiBattista… - Proceedings of the …, 2016 - pnas.org
Understanding how geography, oceanography, and climate have ultimately shaped marine
biodiversity requires aligning the distributions of genetic diversity across multiple taxa. Here …

Thermal adaptation and clinal mitochondrial DNA variation of European anchovy

G Silva, FP Lima, P Martel… - Proceedings of the …, 2014 - royalsocietypublishing.org
Natural populations of widely distributed organisms often exhibit genetic clinal variation over
their geographical ranges. The European anchovy, Engraulis encrasicolus, illustrates this by …

Climate‐driven range shifts explain the distribution of extant gene pools and predict future loss of unique lineages in a marine brown alga

J Assis, EA Serrao, B Claro, C Perrin… - Molecular …, 2014 - Wiley Online Library
The climate‐driven dynamics of species ranges is a critical research question in
evolutionary ecology. We ask whether present intraspecific diversity is determined by the …

A comparative review of macromedusae in eastern boundary currents

MJ Gibbons, H Skrypzeck, RD Brodeur… - … and Marine Biology, 2021 - taylorfrancis.com
The productive eastern boundary current (EBC) systems provide significant sources of
global marine protein and have been subject to intense research over the last 50 years. Yet …

Past climate changes and strong oceanographic barriers structured low‐latitude genetic relics for the golden kelp Laminaria ochroleuca

J Assis, EÁ Serrão, NC Coelho… - Journal of …, 2018 - Wiley Online Library
Aim Drivers of intraspecific biodiversity include past climate‐driven range shifts and
contemporary ecological conditions mediating connectivity, but these are rarely integrated in …

Ocean currents shape the genetic structure of a kelp in southwestern Africa

J Assis, J Neiva, JJ Bolton, MD Rothman… - Journal of …, 2022 - Wiley Online Library
Aim Drivers of extant population genetic structure include past climate‐driven range shifts
and vicariant events, as well as gene flow mediated by dispersal and habitat continuity …

Weak biodiversity connectivity in the European network of no-take marine protected areas

J Assis, E Fragkopoulou, EA Serrão, BH e Costa… - Science of the Total …, 2021 - Elsevier
The need for international cooperation in marine resource management and conservation
has been reflected in the increasing number of agreements aiming for effective and well …

Anomalous ocean currents and European anchovy dispersal in the Iberian ecosystem

A Teles-Machado, SM Plecha, A Peliz… - Marine Ecology Progress …, 2024 - int-res.com
Unlike other upwelling areas where sardine and anchovy species dominate the pelagic
ecosystems, the Western Iberian ecosystem has been consistently dominated by European …

Genetic population structure of anchovy (Engraulis encrasicolus) in North-western Europe and variability in the seasonal distribution of the stocks

M Huret, C Lebigre, M Iriondo, I Montes, A Estonba - Fisheries Research, 2020 - Elsevier
A prerequisite in fisheries management is to identify biological meaningful delineations of
stocks, the fundamental exploited units. The European anchovy is one such species in need …