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Using clusterProfiler to characterize multiomics data
With the advent of multiomics, software capable of multidimensional enrichment analysis
has become increasingly crucial for uncovering gene set variations in biological processes …
has become increasingly crucial for uncovering gene set variations in biological processes …
Short-chain fatty-acid-producing bacteria: key components of the human gut microbiota
Short-chain fatty acids (SCFAs) play a key role in health and disease, as they regulate gut
homeostasis and their deficiency is involved in the pathogenesis of several disorders …
homeostasis and their deficiency is involved in the pathogenesis of several disorders …
Butyrate producers,“The Sentinel of Gut”: Their intestinal significance with and beyond butyrate, and prospective use as microbial therapeutics
Gut-microbial butyrate is a short-chain fatty acid (SCFA) of significant physiological
importance than the other major SCFAs (acetate and propionate). Most butyrate producers …
importance than the other major SCFAs (acetate and propionate). Most butyrate producers …
Bile acids and the gut microbiota: metabolic interactions and impacts on disease
Despite decades of bile acid research, diverse biological roles for bile acids have been
discovered recently due to developments in understanding the human microbiota. As …
discovered recently due to developments in understanding the human microbiota. As …
Microplastics in human food chains: Food becoming a threat to health safety
While versatile application of plastics has generated huge benefits in our life, the 'plastic end-
of-life'comes with downsides of emerging concern is plastic particles within all parts of …
of-life'comes with downsides of emerging concern is plastic particles within all parts of …
[HTML][HTML] Gut microbiome lipid metabolism and its impact on host physiology
Metabolites produced by commensal gut microbes impact host health through their
recognition by the immune system and their influence on numerous metabolic pathways …
recognition by the immune system and their influence on numerous metabolic pathways …
Ruminococcus gnavus: friend or foe for human health
EH Crost, E Coletto, A Bell… - FEMS microbiology …, 2023 - academic.oup.com
Ruminococcus gnavus was first identified in 1974 as a strict anaerobe in the gut of healthy
individuals, and for several decades, its study has been limited to specific enzymes or …
individuals, and for several decades, its study has been limited to specific enzymes or …
[HTML][HTML] Targeting gut microbiota and metabolism as the major probiotic mechanism-An evidence-based review
T Ma, X Shen, X Shi, HA Sakandar, K Quan, Y Li… - Trends in Food Science …, 2023 - Elsevier
Background The human gut hosts complex microbial communities, which are linked to
health and disease. The gut microbiota is continuously reshaped by multiple environmental …
health and disease. The gut microbiota is continuously reshaped by multiple environmental …
Bile acids as modulators of gut microbiota composition and function
AB Larabi, HLP Masson, AJ Bäumler - Gut Microbes, 2023 - Taylor & Francis
Changes in the composition of gut-associated microbial communities are associated with
many human illnesses, but the factors driving dysbiosis remain incompletely understood …
many human illnesses, but the factors driving dysbiosis remain incompletely understood …
[HTML][HTML] Gut microbiota-derived bile acids in intestinal immunity, inflammation, and tumorigenesis
J Cai, L Sun, FJ Gonzalez - Cell host & microbe, 2022 - cell.com
Inflammatory bowel disease (IBD) and colorectal cancer (CRC) are heterogeneous intestinal
diseases that threaten the health of an increasing number of individuals as their lifestyles …
diseases that threaten the health of an increasing number of individuals as their lifestyles …