Unveiling the crucial role of soil microorganisms in carbon cycling: A review

H Wu, H Cui, C Fu, R Li, F Qi, Z Liu, G Yang… - Science of the Total …, 2024 - Elsevier
Soil microorganisms, by actively participating in the decomposition and transformation of
organic matter through diverse metabolic pathways, play a pivotal role in carbon cycling …

Life and death in the soil microbiome: how ecological processes influence biogeochemistry

NW Sokol, E Slessarev, GL Marschmann… - Nature Reviews …, 2022 - nature.com
Soil microorganisms shape global element cycles in life and death. Living soil
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …

Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome

AA Zayed, JM Wainaina, G Dominguez-Huerta… - Science, 2022 - science.org
Whereas DNA viruses are known to be abundant, diverse, and commonly key ecosystem
players, RNA viruses are insufficiently studied outside disease settings. In this study, we …

RNA viromes from terrestrial sites across China expand environmental viral diversity

YM Chen, S Sadiq, JH Tian, X Chen, XD Lin… - Nature …, 2022 - nature.com
Environmental RNA viruses are ubiquitous and diverse, and probably have important
ecological and biogeochemical impacts. Understanding the global diversity of RNA viruses …

Soil viral diversity, ecology and climate change

JK Jansson, R Wu - Nature Reviews Microbiology, 2023 - nature.com
Soil viruses are highly abundant and have important roles in the regulation of host dynamics
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …

[HTML][HTML] Expansion of the global RNA virome reveals diverse clades of bacteriophages

U Neri, YI Wolf, S Roux, AP Camargo, B Lee… - Cell, 2022 - cell.com
High-throughput RNA sequencing offers broad opportunities to explore the Earth RNA
virome. Mining 5,150 diverse metatranscriptomes uncovered> 2.5 million RNA virus contigs …

Interrogating the viral dark matter of the rumen ecosystem with a global virome database

M Yan, AA Pratama, S Somasundaram, Z Li… - Nature …, 2023 - nature.com
The diverse rumen virome can modulate the rumen microbiome, but it remains largely
unexplored. Here, we mine 975 published rumen metagenomes for viral sequences, create …

[HTML][HTML] The gut virome database reveals age-dependent patterns of virome diversity in the human gut

AC Gregory, O Zablocki, AA Zayed, A Howell… - Cell host & …, 2020 - cell.com
The gut microbiome profoundly affects human health and disease, and their infecting viruses
are likely as important, but often missed because of reference database limitations. Here, we …

The Baltimore classification of viruses 50 years later: how does it stand in the light of virus evolution?

EV Koonin, M Krupovic, VI Agol - Microbiology and Molecular …, 2021 - Am Soc Microbiol
SUMMARY Fifty years ago, David Baltimore published a brief conceptual paper delineating
the classification of viruses by the routes of genome expression. The six “Baltimore classes” …

Extreme summers impact cropland and grassland soil microbiomes

Q Bei, T Reitz, B Schnabel, N Eisenhauer… - The ISME …, 2023 - academic.oup.com
The increasing frequency of extreme weather events highlights the need to understand how
soil microbiomes respond to such disturbances. Here, metagenomics was used to …