At a crossroads: how to translate the roles of PI3K in oncogenic and metabolic signalling into improvements in cancer therapy

N Vasan, LC Cantley - Nature Reviews Clinical Oncology, 2022 - nature.com
Numerous agents targeting various phosphatidylinositol 3-kinase (PI3K) pathway
components, including PI3K, AKT and mTOR, have been tested in oncology clinical trials …

The dynamic control of signal transduction networks in cancer cells

W Kolch, M Halasz, M Granovskaya… - Nature Reviews …, 2015 - nature.com
Cancer is often considered a genetic disease. However, much of the enormous plasticity of
cancer cells to evolve different phenotypes, to adapt to challenging microenvironments and …

The global phosphorylation landscape of SARS-CoV-2 infection

M Bouhaddou, D Memon, B Meyer, KM White… - Cell, 2020 - cell.com
The causative agent of the coronavirus disease 2019 (COVID-19) pandemic, severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2), has infected millions and killed …

Proteogenomics connects somatic mutations to signalling in breast cancer

P Mertins, DR Mani, KV Ruggles, MA Gillette… - Nature, 2016 - nature.com
Somatic mutations have been extensively characterized in breast cancer, but the effects of
these genetic alterations on the proteomic landscape remain poorly understood. Here we …

Somatic activating PIK3CA mutations cause venous malformation

N Limaye, J Kangas, A Mendola, C Godfraind… - The American Journal of …, 2015 - cell.com
Somatic mutations in TEK, the gene encoding endothelial cell tyrosine kinase receptor TIE2,
cause more than half of sporadically occurring unifocal venous malformations (VMs). Here …

Quantitative proteomics using SILAC: Principles, applications, and developments

X Chen, S Wei, Y Ji, X Guo, F Yang - proteomics, 2015 - Wiley Online Library
SILAC is based on direct addition of selected stable isotope amino acids into the cell culture
medium, allowing superior quantitative analysis of the cellular proteome compared to other …

Interpretation of cancer mutations using a multiscale map of protein systems

F Zheng, MR Kelly, DJ Ramms, ML Heintschel, K Tao… - Science, 2021 - science.org
INTRODUCTION Tumor genome sequencing has revealed that, beyond a few commonly
mutated genes, most mutations that affect cancer genomes are rare. To interpret these rare …

Synergy in activating class I PI3Ks

JE Burke, RL Williams - Trends in biochemical sciences, 2015 - cell.com
The class I phosphoinositide 3-kinases (PI3Ks) are lipid kinases that transduce a host of
cellular signals and regulate a broad range of essential functions including growth …

Correlation between PIK3CA mutations in cell-free DNA and everolimus efficacy in HR+, HER2− advanced breast cancer: results from BOLERO-2

ME Moynahan, D Chen, W He, P Sung… - British journal of …, 2017 - nature.com
Background: The current analysis was performed to evaluate the impact of PIK3CA hotspot
mutations on everolimus efficacy in BOLERO-2 participants, using cell-free DNA (cfDNA) …

[HTML][HTML] System-wide identification and prioritization of enzyme substrates by thermal analysis

AA Saei, CM Beusch, P Sabatier, JA Wells… - Nature …, 2021 - nature.com
Despite the immense importance of enzyme–substrate reactions, there is a lack of general
and unbiased tools for identifying and prioritizing substrate proteins that are modified by the …