Machine learning methods for small data challenges in molecular science

B Dou, Z Zhu, E Merkurjev, L Ke, L Chen… - Chemical …, 2023 - ACS Publications
Small data are often used in scientific and engineering research due to the presence of
various constraints, such as time, cost, ethics, privacy, security, and technical limitations in …

The role of AI in drug discovery: challenges, opportunities, and strategies

A Blanco-Gonzalez, A Cabezon, A Seco-Gonzalez… - Pharmaceuticals, 2023 - mdpi.com
Artificial intelligence (AI) has the potential to revolutionize the drug discovery process,
offering improved efficiency, accuracy, and speed. However, the successful application of AI …

AlphaFold, artificial intelligence (AI), and allostery

R Nussinov, M Zhang, Y Liu, H Jang - The Journal of Physical …, 2022 - ACS Publications
AlphaFold has burst into our lives. A powerful algorithm that underscores the strength of
biological sequence data and artificial intelligence (AI). AlphaFold has appended projects …

Generative machine learning for de novo drug discovery: A systematic review

DD Martinelli - Computers in Biology and Medicine, 2022 - Elsevier
Recent research on artificial intelligence indicates that machine learning algorithms can
auto-generate novel drug-like molecules. Generative models have revolutionized de novo …

Converting nanotoxicity data to information using artificial intelligence and simulation

X Yan, T Yue, DA Winkler, Y Yin, H Zhu… - Chemical …, 2023 - ACS Publications
Decades of nanotoxicology research have generated extensive and diverse data sets.
However, data is not equal to information. The question is how to extract critical information …

Modeling and design of heterogeneous hierarchical bioinspired spider web structures using deep learning and additive manufacturing

W Lu, NA Lee, MJ Buehler - Proceedings of the National …, 2023 - National Acad Sciences
Spider webs are incredible biological structures, comprising thin but strong silk filament and
arranged into complex hierarchical architectures with striking mechanical properties (eg …

Application of artificial intelligence in drug design: A review

S Singh, N Kaur, A Gehlot - Computers in Biology and Medicine, 2024 - Elsevier
Artificial intelligence (AI) is a field of computer science that involves acquiring information,
develo** rule bases, and mimicking human behaviour. The fundamental concept behind …

A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function

Z Wang, L Zheng, S Wang, M Lin, Z Wang… - Briefings in …, 2023 - academic.oup.com
The recently reported machine learning-or deep learning-based scoring functions (SFs)
have shown exciting performance in predicting protein–ligand binding affinities with fruitful …

DeepCompoundNet: enhancing compound–protein interaction prediction with multimodal convolutional neural networks

F Palhamkhani, M Alipour, A Dehnad… - Journal of …, 2025 - Taylor & Francis
Virtual screening has emerged as a valuable computational tool for predicting compound–
protein interactions, offering a cost-effective and rapid approach to identifying potential …

Artificial intelligence revolutionizing drug development: Exploring opportunities and challenges

PC Tiwari, R Pal, MJ Chaudhary… - Drug Development …, 2023 - Wiley Online Library
By harnessing artificial intelligence (AI) algorithms and machine learning techniques, the
entire drug discovery process stands to undergo a profound transformation, offering a …