Revisiting the shikimate pathway and highlighting their enzyme inhibitors

AM Almeida, R Marchiosi, J Abrahão… - Phytochemistry …, 2024 - Springer
Absent in animals and with only seven enzymatic reactions toward the synthesis of
chorismate and aromatic amino acids, the shikimate pathway is a crucial target for …

The shikimate pathway: review of amino acid sequence, function and three-dimensional structures of the enzymes

R Mir, S Jallu, TP Singh - Critical reviews in microbiology, 2015 - Taylor & Francis
The aromatic compounds such as aromatic amino acids, vitamin K and ubiquinone are
important prerequisites for the metabolism of an organism. All organisms can synthesize …

Novel targets for tuberculosis drug discovery

K Mdluli, M Spigelman - Current opinion in pharmacology, 2006 - Elsevier
Since the determination of the Mycobacterium tuberculosis genome sequence, various
groups have used the genomic information to identify and validate targets as the basis for …

Hydrogen bonds in protein-ligand complexes

G Bitencourt-Ferreira, M Veit-Acosta… - Docking screens for …, 2019 - Springer
Fast and reliable evaluation of the hydrogen bond potential energy has a significant impact
in the drug design and development since it allows the assessment of large databases of …

Mycobacterium tuberculosis Shikimate Pathway Enzymes as Targets for the Rational Design of Anti-Tuberculosis Drugs

JES Nunes, MA Duque, TF de Freitas, L Galina… - Molecules, 2020 - mdpi.com
Roughly a third of the world's population is estimated to have latent Mycobacterium
tuberculosis infection, being at risk of develo** active tuberculosis (TB) during their …

MolDock applied to structure-based virtual screening

J De Azevedo, F Walter - Current drug targets, 2010 - ingentaconnect.com
Molecular docking is a simulation process where the binding of a small molecule is
identified in the structure of a protein target. There are several different computational …

Homology modeling of protein targets with MODELLER

G Bitencourt-Ferreira, WF de Azevedo - Docking Screens for Drug …, 2019 - Springer
Homology modeling is a computational approach to generate three-dimensional structures
of protein targets when experimental data about similar proteins are available. Although …

Bio-inspired algorithms applied to molecular docking simulations

G Heberlé, W F. de Azevedo - Current medicinal chemistry, 2011 - benthamdirect.com
Nature as a source of inspiration has been shown to have a great beneficial impact on the
development of new computational methodologies. In this scenario, analyses of the …

Mycobacterial shikimate pathway enzymes as targets for drug design

RG Ducati, LA Basso, DS Santos - Current drug targets, 2007 - ingentaconnect.com
The aetiological agent of tuberculosis (TB), Mycobacterium tuberculosis, is responsible for
millions of deaths annually. The increasing prevalence of the disease, the emergence of …

Molecular dynamics simulations of protein targets identified in Mycobacterium tuberculosis

W F. de Azevedo - Current medicinal chemistry, 2011 - benthamdirect.com
Application of molecular dynamics simulation technique has become a conventional
computational methodology to calculate significant processes at the molecular level. This …