[HTML][HTML] Designing future crops: genomics-assisted breeding comes of age

RK Varshney, A Bohra, J Yu, A Graner, Q Zhang… - Trends in plant …, 2021 - cell.com
Over the past decade, genomics-assisted breeding (GAB) has been instrumental in
harnessing the potential of modern genome resources and characterizing and exploiting …

Twenty years of plant genome sequencing: achievements and challenges

Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …

Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits

Y Huang, J He, Y Xu, W Zheng, S Wang, P Chen… - Nature Genetics, 2023 - nature.com
The orange subfamily (Aurantioideae) contains several Citrus species cultivated worldwide,
such as sweet orange and lemon. The origin of Citrus species has long been debated and …

Genomics of the origin and evolution of Citrus

GA Wu, J Terol, V Ibanez, A López-García… - Nature, 2018 - nature.com
The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide,
includes an uncertain number of species. Here we describe ten natural citrus species, using …

Nutrients and bioactives in citrus fruits: Different citrus varieties, fruit parts, and growth stages

X Lu, C Zhao, H Shi, Y Liao, F Xu, H Du… - Critical Reviews in …, 2023 - Taylor & Francis
Citrus fruits are consumed in large quantities worldwide due to their attractive aromas and
taste, as well as their high nutritional values and various health-promoting effects, which are …

Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps

C Belser, B Istace, E Denis, M Dubarry, FC Baurens… - Nature plants, 2018 - nature.com
Plant genomes are often characterized by a high level of repetitiveness and polyploid
nature. Consequently, creating genome assemblies for plant genomes is challenging. The …

The structure and function of the global citrus rhizosphere microbiome

J Xu, Y Zhang, P Zhang, P Trivedi, N Riera… - Nature …, 2018 - nature.com
Citrus is a globally important, perennial fruit crop whose rhizosphere microbiome is thought
to play an important role in promoting citrus growth and health. Here, we report a …

Generation of the transgene-free canker-resistant Citrus sinensis using Cas12a/crRNA ribonucleoprotein in the T0 generation

H Su, Y Wang, J Xu, AA Omar, JW Grosser… - Nature …, 2023 - nature.com
Citrus canker caused by Xanthomonas citri subsp. citri (Xcc) is a destructive citrus disease
worldwide. Generating disease-resistant cultivars is the most effective, environmentally …

Evolutionary genomics of grape (Vitis vinifera ssp. vinifera) domestication

Y Zhou, M Massonnet, JS Sanjak, D Cantu… - Proceedings of the …, 2017 - pnas.org
We gathered genomic data from grapes (Vitis vinifera ssp. vinifera), a clonally propagated
perennial crop, to address three ongoing mysteries about plant domestication. The first is the …

Transgene-free genome editing of vegetatively propagated and perennial plant species in the T0 generation via a co-editing strategy

X Huang, H Jia, J Xu, Y Wang, J Wen, N Wang - Nature Plants, 2023 - nature.com
Transgene-free plant genome editing in the T0 generation is highly desirable but
challenging,. Here we achieved such a goal using a co-editing strategy via Agrobacterium …