Designing salt stress‐resilient crops: Current progress and future challenges

X Liang, J Li, Y Yang, C Jiang… - Journal of integrative plant …, 2024 - Wiley Online Library
Excess soil salinity affects large regions of land and is a major hindrance to crop production
worldwide. Therefore, understanding the molecular mechanisms of plant salt tolerance has …

[HTML][HTML] Designing future crops: genomics-assisted breeding comes of age

RK Varshney, A Bohra, J Yu, A Graner, Q Zhang… - Trends in plant …, 2021 - cell.com
Over the past decade, genomics-assisted breeding (GAB) has been instrumental in
harnessing the potential of modern genome resources and characterizing and exploiting …

Plant domestication shapes rhizosphere microbiome assembly and metabolic functions

H Yue, W Yue, S Jiao, H Kim, YH Lee, G Wei, W Song… - Microbiome, 2023 - Springer
Background The rhizosphere microbiome, which is shaped by host genotypes, root
exudates, and plant domestication, is crucial for sustaining agricultural plant growth. Despite …

Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance

PF Ma, YL Liu, C Guo, G **, ZH Guo, L Mao… - Nature Genetics, 2024 - nature.com
Polyploidy (genome duplication) is a pivotal force in evolution. However, the interactions
between parental genomes in a polyploid nucleus, frequently involving subgenome …

The mosaic oat genome gives insights into a uniquely healthy cereal crop

N Kamal, N Tsardakas Renhuldt, J Bentzer… - Nature, 2022 - nature.com
Cultivated oat (Avena sativa L.) is an allohexaploid (AACCDD, 2 n= 6 x= 42) thought to have
been domesticated more than 3,000 years ago while growing as a weed in wheat, emmer …

[HTML][HTML] Multiple wheat genomes reveal global variation in modern breeding

S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa… - Nature, 2020 - nature.com
Advances in genomics have expedited the improvement of several agriculturally important
crops but similar efforts in wheat (Triticum spp.) have been more challenging. This is largely …

Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly

T Zhu, L Wang, H Rimbert, JC Rodriguez… - The Plant …, 2021 - Wiley Online Library
Until recently, achieving a reference‐quality genome sequence for bread wheat was long
thought beyond the limits of genome sequencing and assembly technology, primarily due to …

From telomere to telomere: The transcriptional and epigenetic state of human repeat elements

SJ Hoyt, JM Storer, GA Hartley, PGS Grady… - Science, 2022 - science.org
Mobile elements and repetitive genomic regions are sources of lineage-specific genomic
innovation and uniquely fingerprint individual genomes. Comprehensive analyses of such …

Variation in TaSPL6-D confers salinity tolerance in bread wheat by activating TaHKT1;5-D while preserving yield-related traits

M Wang, J Cheng, J Wu, J Chen, D Liu, C Wang… - Nature Genetics, 2024 - nature.com
Na+ exclusion from above-ground tissues via the Na+-selective transporter HKT1; 5 is a
major salt-tolerance mechanism in crops. Using the expression genome-wide association …

[HTML][HTML] A route to de novo domestication of wild allotetraploid rice

H Yu, T Lin, X Meng, H Du, J Zhang, G Liu, M Chen… - Cell, 2021 - cell.com
Cultivated rice varieties are all diploid, and polyploidization of rice has long been desired
because of its advantages in genome buffering, vigorousness, and environmental …