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Current challenges and best-practice protocols for microbiome analysis
Analyzing the microbiome of diverse species and environments using next-generation
sequencing techniques has significantly enhanced our understanding on metabolic …
sequencing techniques has significantly enhanced our understanding on metabolic …
[HTML][HTML] Next generation and other sequencing technologies in diagnostic microbiology and infectious diseases
EE Hilt, P Ferrieri - Genes, 2022 - mdpi.com
Next-generation sequencing (NGS) technologies have become increasingly available for
use in the clinical microbiology diagnostic environment. There are three main applications of …
use in the clinical microbiology diagnostic environment. There are three main applications of …
Recent advanced technologies for the characterization of xenobiotic-degrading microorganisms and microbial communities
S Mishra, Z Lin, S Pang, W Zhang, P Bhatt… - … in Bioengineering and …, 2021 - frontiersin.org
Global environmental contamination with a complex mixture of xenobiotics has become a
major environmental issue worldwide. Many xenobiotic compounds severely impact the …
major environmental issue worldwide. Many xenobiotic compounds severely impact the …
Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
The widespread occurrence of repetitive stretches of DNA in genomes of organisms across
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
[HTML][HTML] The sequence of sequencers: The history of sequencing DNA
Determining the order of nucleic acid residues in biological samples is an integral
component of a wide variety of research applications. Over the last fifty years large numbers …
component of a wide variety of research applications. Over the last fifty years large numbers …
The gut microbiome in human neurological disease: a review
Almost half the cells and 1% of the unique genes found in our bodies are human, the rest
are from microbes, predominantly bacteria, archaea, fungi, and viruses. These …
are from microbes, predominantly bacteria, archaea, fungi, and viruses. These …
Poultry gut health–microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
The gastrointestinal tract (GIT) health impacts animal productivity. The poultry microbiome
has functions which range from protection against pathogens and nutrients production, to …
has functions which range from protection against pathogens and nutrients production, to …
Meta-analysis reveals reproducible gut microbiome alterations in response to a high-fat diet
Multiple research groups have shown that diet impacts the gut microbiome; however,
variability in experimental design and quantitative assessment have made it challenging to …
variability in experimental design and quantitative assessment have made it challenging to …
Diversity and activity of communities inhabiting plastic debris in the North Pacific Gyre
Marine plastic debris has become a significant concern in ocean ecosystems worldwide.
Little is known, however, about its influence on microbial community structure and function …
Little is known, however, about its influence on microbial community structure and function …
The road to metagenomics: from microbiology to DNA sequencing technologies and bioinformatics
The study of microorganisms that pervade each and every part of this planet has
encountered many challenges through time such as the discovery of unknown organisms …
encountered many challenges through time such as the discovery of unknown organisms …