Fiji: an open-source platform for biological-image analysis
Fiji is a distribution of the popular open-source software ImageJ focused on biological-image
analysis. Fiji uses modern software engineering practices to combine powerful software …
analysis. Fiji uses modern software engineering practices to combine powerful software …
Polymerization shrinkage assessment of dental resin composites: a literature review
D Kaisarly, ME Gezawi - Odontology, 2016 - Springer
Composite restorations are widely used worldwide, but the polymerization shrinkage is their
main disadvantage that may lead to clinical failures and adverse consequences. This review …
main disadvantage that may lead to clinical failures and adverse consequences. This review …
Deep learning in medical image registration: a survey
The establishment of image correspondence through robust image registration is critical to
many clinical tasks such as image fusion, organ atlas creation, and tumor growth monitoring …
many clinical tasks such as image fusion, organ atlas creation, and tumor growth monitoring …
Shrinkage-mediated imaging of entire organs and organisms using uDISCO
Recent tissue-clearing approaches have become important alternatives to standard
histology approaches. However, light scattering in thick tissues and the size restrictions on …
histology approaches. However, light scattering in thick tissues and the size restrictions on …
TrakEM2 software for neural circuit reconstruction
A key challenge in neuroscience is the expeditious reconstruction of neuronal circuits. For
model systems such as Drosophila and C. elegans, the limiting step is no longer the …
model systems such as Drosophila and C. elegans, the limiting step is no longer the …
Virtual alignment of pathology image series for multi-gigapixel whole slide images
Interest in spatial omics is on the rise, but generation of highly multiplexed images remains
challenging, due to cost, expertise, methodical constraints, and access to technology. An …
challenging, due to cost, expertise, methodical constraints, and access to technology. An …
3D reconstruction of histological sections: Application to mammary gland tissue
I Arganda‐Carreras… - Microscopy research …, 2010 - Wiley Online Library
In this article, we present a novel method for the automatic 3D reconstruction of thick tissue
blocks from 2D histological sections. The algorithm completes a high‐content (multiscale …
blocks from 2D histological sections. The algorithm completes a high‐content (multiscale …
A cellular resolution atlas of Broca's area
Brain cells are arranged in laminar, nuclear, or columnar structures, spanning a range of
scales. Here, we construct a reliable cell census in the frontal lobe of human cerebral cortex …
scales. Here, we construct a reliable cell census in the frontal lobe of human cerebral cortex …
[HTML][HTML] A modular platform for automated cryo-FIB workflows
Lamella micromachining by focused ion beam milling at cryogenic temperature (cryo-FIB)
has matured into a preparation method widely used for cellular cryo-electron tomography …
has matured into a preparation method widely used for cellular cryo-electron tomography …
ANHIR: automatic non-rigid histological image registration challenge
Automatic Non-rigid Histological Image Registration (ANHIR) challenge was organized to
compare the performance of image registration algorithms on several kinds of microscopy …
compare the performance of image registration algorithms on several kinds of microscopy …