Graph neural networks and their current applications in bioinformatics

XM Zhang, L Liang, L Liu, MJ Tang - Frontiers in genetics, 2021 - frontiersin.org
Graph neural networks (GNNs), as a branch of deep learning in non-Euclidean space,
perform particularly well in various tasks that process graph structure data. With the rapid …

[HTML][HTML] Graph-based deep learning for medical diagnosis and analysis: past, present and future

D Ahmedt-Aristizabal, MA Armin, S Denman, C Fookes… - Sensors, 2021 - mdpi.com
With the advances of data-driven machine learning research, a wide variety of prediction
problems have been tackled. It has become critical to explore how machine learning and …

A survey on graph neural networks and graph transformers in computer vision: A task-oriented perspective

C Chen, Y Wu, Q Dai, HY Zhou, M Xu… - … on Pattern Analysis …, 2024 - ieeexplore.ieee.org
Graph Neural Networks (GNNs) have gained momentum in graph representation learning
and boosted the state of the art in a variety of areas, such as data mining (eg, social network …

Using DeepGCN to identify the autism spectrum disorder from multi-site resting-state data

M Cao, M Yang, C Qin, X Zhu, Y Chen, J Wang… - … Signal Processing and …, 2021 - Elsevier
It is challenging to discriminate Autism spectrum disorder (ASD) from a highly
heterogeneous database, because there is a great deal of uncontrollable variability in the …

[HTML][HTML] Network learning for biomarker discovery

Y Ding, M Fu, P Luo, FX Wu - International Journal of Network Dynamics …, 2023 - sciltp.com
Everything is connected and thus networks are instrumental in not only modeling complex
systems with many components, but also accommodating knowledge about their …

Transformer-based 3D U-Net for pulmonary vessel segmentation and artery-vein separation from CT images

Y Wu, S Qi, M Wang, S Zhao, H Pang, J Xu… - Medical & Biological …, 2023 - Springer
Transformer-based methods have led to the revolutionizing of multiple computer vision
tasks. Inspired by this, we propose a transformer-based network with a channel-enhanced …

Use of artificial intelligence in imaging in rheumatology–current status and future perspectives

B Stoel - RMD open, 2020 - rmdopen.bmj.com
After decades of basic research with many setbacks, artificial intelligence (AI) has recently
obtained significant breakthroughs, enabling computer programs to outperform human …

Artificial intelligence to analyze magnetic resonance imaging in rheumatology

LC Adams, KK Bressem, K Ziegeler, JL Vahldiek… - Joint Bone Spine, 2024 - Elsevier
Rheumatic disorders present a global health challenge, marked by inflammation and
damage to joints, bones, and connective tissues. Accurate, timely diagnosis and appropriate …

Graph convolutional networks for multi-modality medical imaging: Methods, architectures, and clinical applications

K Ding, M Zhou, Z Wang, Q Liu, CW Arnold… - arxiv preprint arxiv …, 2022 - arxiv.org
Image-based characterization and disease understanding involve integrative analysis of
morphological, spatial, and topological information across biological scales. The …

Prediction of chronic thromboembolic pulmonary hypertension with standardised evaluation of initial computed tomography pulmonary angiography performed for …

GJAM Boon, YM Ende-Verhaar, LFM Beenen… - European …, 2022 - Springer
Objectives Closer reading of computed tomography pulmonary angiography (CTPA) scans
of patients presenting with acute pulmonary embolism (PE) may identify those at high risk of …