Volume electron microscopy

CJ Peddie, C Genoud, A Kreshuk, K Meechan… - Nature Reviews …, 2022 - nature.com
Life exists in three dimensions, but until the turn of the century most electron microscopy
methods provided only 2D image data. Recently, electron microscopy techniques capable of …

Recent publications from the Alzheimer's Disease Neuroimaging Initiative: Reviewing progress toward improved AD clinical trials

MW Weiner, DP Veitch, PS Aisen, LA Beckett… - Alzheimer's & …, 2017 - Elsevier
Abstract Introduction The Alzheimer's Disease Neuroimaging Initiative (ADNI) has continued
development and standardization of methodologies for biomarkers and has provided an …

ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset

MR Hernandez Petzsche, E de la Rosa, U Hanning… - Scientific data, 2022 - nature.com
Magnetic resonance imaging (MRI) is an important imaging modality in stroke. Computer
based automated medical image processing is increasingly finding its way into clinical …

ARG1-expressing microglia show a distinct molecular signature and modulate postnatal development and function of the mouse brain

V Stratoulias, R Ruiz, S Kanatani, AM Osman… - Nature …, 2023 - nature.com
Molecular diversity of microglia, the resident immune cells in the CNS, is reported. Whether
microglial subsets characterized by the expression of specific proteins constitute subtypes …

Virtual alignment of pathology image series for multi-gigapixel whole slide images

CD Gatenbee, AM Baker, S Prabhakaran… - Nature …, 2023 - nature.com
Interest in spatial omics is on the rise, but generation of highly multiplexed images remains
challenging, due to cost, expertise, methodical constraints, and access to technology. An …

VerSe: a vertebrae labelling and segmentation benchmark for multi-detector CT images

A Sekuboyina, ME Husseini, A Bayat, M Löffler… - Medical image …, 2021 - Elsevier
Vertebral labelling and segmentation are two fundamental tasks in an automated spine
processing pipeline. Reliable and accurate processing of spine images is expected to …

[HTML][HTML] Map** of brain activity by automated volume analysis of immediate early genes

N Renier, EL Adams, C Kirst, Z Wu, R Azevedo, J Kohl… - Cell, 2016 - cell.com
Understanding how neural information is processed in physiological and pathological states
would benefit from precise detection, localization, and quantification of the activity of all …

Anatomically defined and functionally distinct dorsal raphe serotonin sub-systems

J Ren, D Friedmann, J **ong, CD Liu, BR Ferguson… - Cell, 2018 - cell.com
The dorsal raphe (DR) constitutes a major serotonergic input to the forebrain and modulates
diverse functions and brain states, including mood, anxiety, and sensory and motor …

BIRNet: Brain image registration using dual-supervised fully convolutional networks

J Fan, X Cao, PT Yap, D Shen - Medical image analysis, 2019 - Elsevier
In this paper, we propose a deep learning approach for image registration by predicting
deformation from image appearance. Since obtaining ground-truth deformation fields for …

Deep learning for fully-automated localization and segmentation of rectal cancer on multiparametric MR

S Trebeschi, JJM van Griethuysen, DMJ Lambregts… - Scientific reports, 2017 - nature.com
Abstract Multiparametric Magnetic Resonance Imaging (MRI) can provide detailed
information of the physical characteristics of rectum tumours. Several investigations suggest …