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Molecular and evolutionary determinants of bacteriophage host range
The host range of a bacteriophage is the taxonomic diversity of hosts it can successfully
infect. Host range, one of the central traits to understand in phages, is determined by a range …
infect. Host range, one of the central traits to understand in phages, is determined by a range …
Schrödinger's microbes: tools for distinguishing the living from the dead in microbial ecosystems
While often obvious for macroscopic organisms, determining whether a microbe is dead or
alive is fraught with complications. Fields such as microbial ecology, environmental health …
alive is fraught with complications. Fields such as microbial ecology, environmental health …
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Ocean microbes drive biogeochemical cycling on a global scale. However, this cycling is
constrained by viruses that affect community composition, metabolic activity, and …
constrained by viruses that affect community composition, metabolic activity, and …
Organochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes
Viruses significantly influence local and global biogeochemical cycles and help bacteria to
survive in different environments by encoding various auxiliary metabolic genes (AMGs) …
survive in different environments by encoding various auxiliary metabolic genes (AMGs) …
Studying the gut virome in the metagenomic era: challenges and perspectives
The human gut harbors a complex ecosystem of microorganisms, including bacteria and
viruses. With the rise of next-generation sequencing technologies, we have seen a quantum …
viruses. With the rise of next-generation sequencing technologies, we have seen a quantum …
Single-virus genomics reveals hidden cosmopolitan and abundant viruses
F Martinez-Hernandez, O Fornas… - Nature …, 2017 - nature.com
Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus
genome information hinders our ability to answer fundamental, biological questions …
genome information hinders our ability to answer fundamental, biological questions …
Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale
Disease emergence events regularly result from human activities such as agriculture, which
frequently brings large populations of genetically uniform hosts into contact with potential …
frequently brings large populations of genetically uniform hosts into contact with potential …
The human gut virome: composition, colonization, interactions, and impacts on human health
The gut virome is an incredibly complex part of the gut ecosystem. Gut viruses play a role in
many disease states, but it is unknown to what extent the gut virome impacts everyday …
many disease states, but it is unknown to what extent the gut virome impacts everyday …
Moisture modulates soil reservoirs of active DNA and RNA viruses
Soil is known to harbor viruses, but the majority are uncharacterized and their responses to
environmental changes are unknown. Here, we used a multi-omics approach …
environmental changes are unknown. Here, we used a multi-omics approach …
Unifying the known and unknown microbial coding sequence space
Genes of unknown function are among the biggest challenges in molecular biology,
especially in microbial systems, where 40–60% of the predicted genes are unknown …
especially in microbial systems, where 40–60% of the predicted genes are unknown …