Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide-respiring bacteria

F Maphosa, WM de Vos, H Smidt - Trends in Biotechnology, 2010 - cell.com
Various 'omics' methods have enabled environmental probing at the molecular level and
have created an important new paradigm in bioremediation design and management …

The little bacteria that can – diversity, genomics and ecophysiology of 'Dehalococcoides' spp. in contaminated environments

N Taş, MHA Van Eekert, WM De Vos… - Microbial …, 2010 - Wiley Online Library
The fate and persistence of chlorinated organics in the environment have been a concern for
the past 50 years. Industrialization and extensive agricultural activities have led to the …

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel …

FE Löffler, J Yan, KM Ritalahti… - … of systematic and …, 2013 - microbiologyresearch.org
Six obligately anaerobic bacterial isolates (195T, CBDB1, BAV1, VS, FL2 and GT) with
strictly organohalide-respiring metabolisms were obtained from chlorinated solvent …

Perspectives of genetically engineered microbes for groundwater bioremediation

DB Janssen, G Stucki - Environmental Science: Processes & Impacts, 2020 - pubs.rsc.org
Biodegradation is the main process for the removal of organic compounds from the
environment, but proceeds slowly for many synthetic chemicals of environmental concern …

Natural niche for organohalide-respiring Chloroflexi

MJ Krzmarzick, BB Crary, JJ Harding… - Applied and …, 2012 - Am Soc Microbiol
The phylum Chloroflexi contains several isolated bacteria that have been found to respire a
diverse array of halogenated anthropogenic chemicals. The distribution and role of these …

Resilience of organohalide-detoxifying microbial community to oxygen stress in sewage sludge

G Xu, J He - Water Research, 2022 - Elsevier
Organohalide pollutants are prevalent in the environment, causing harms to wildlife and
human. Organohalide-respiring bacteria (OHRB) could detoxify these pollutants in …

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling

M Mehrshad, F Rodriguez-Valera… - The ISME …, 2018 - academic.oup.com
The dark ocean microbiota represents the unknown majority in the global ocean waters. The
SAR202 cluster belonging to the phylum Chloroflexi was the first microbial lineage …

Dehalogenimonas lykanthroporepellens gen. nov., sp. nov., a reductively dehalogenating bacterium isolated from chlorinated solvent-contaminated groundwater

WM Moe, J Yan, MF Nobre… - … of systematic and …, 2009 - microbiologyresearch.org
Two recently reported bacterial strains that are able to reductively dehalogenate
polychlorinated aliphatic alkanes, including 1, 2, 3-trichloropropane, 1, 2-dichloropropane …

Respiratory Vinyl Chloride Reductive Dechlorination to Ethene in TceA-Expressing Dehalococcoides mccartyi

J Yan, J Wang, MI Villalobos Solis, H **… - Environmental …, 2021 - ACS Publications
Bioremediation of chlorinated ethenes in anoxic aquifers hinges on organohalide-respiring
Dehalococcoidia expressing vinyl chloride (VC) reductive dehalogenase (RDase). The tceA …

Ardenticatena maritima gen. nov., sp. nov., a ferric iron- and nitrate-reducing bacterium of the phylum ' Chloroflexi ' isolated from an iron-rich coastal hydrothermal field, and …

S Kawaichi, N Ito, R Kamikawa… - … of systematic and …, 2013 - microbiologyresearch.org
A novel thermophilic, chemoheterotrophic, Gram-negative-staining, multicellular filamentous
bacterium, designated strain 110ST, was isolated from an iron-rich coastal hydrothermal …