Phenotypes in obstructive sleep apnea: a definition, examples and evolution of approaches

AV Zinchuk, MJ Gentry, J Concato, HK Yaggi - Sleep medicine reviews, 2017 - Elsevier
Obstructive sleep apnea (OSA) is a complex and heterogeneous disorder and the apnea
hypopnea index alone can not capture the diverse spectrum of the condition. Enhanced …

Time-series data mining

P Esling, C Agon - ACM Computing Surveys (CSUR), 2012 - dl.acm.org
In almost every scientific field, measurements are performed over time. These observations
lead to a collection of organized data called time series. The purpose of time-series data …

Comparison of RNA-Seq and microarray in transcriptome profiling of activated T cells

S Zhao, WP Fung-Leung, A Bittner, K Ngo, X Liu - PloS one, 2014 - journals.plos.org
To demonstrate the benefits of RNA-Seq over microarray in transcriptome profiling, both
RNA-Seq and microarray analyses were performed on RNA samples from a human T cell …

Data mining in healthcare and biomedicine: a survey of the literature

I Yoo, P Alafaireet, M Marinov… - Journal of medical …, 2012 - Springer
As a new concept that emerged in the middle of 1990's, data mining can help researchers
gain both novel and deep insights and can facilitate unprecedented understanding of large …

Clustering algorithms: their application to gene expression data

J Oyelade, I Isewon, F Oladipupo… - … and Biology insights, 2016 - journals.sagepub.com
Gene expression data hide vital information required to understand the biological process
that takes place in a particular organism in relation to its environment. Deciphering the …

Comparing the performance of biomedical clustering methods

C Wiwie, J Baumbach, R Röttger - Nature methods, 2015 - nature.com
Identifying groups of similar objects is a popular first step in biomedical data analysis, but it
is error-prone and impossible to perform manually. Many computational methods have been …

Clustering cancer gene expression data: a comparative study

MCP De Souto, IG Costa, DS De Araujo, TB Ludermir… - BMC …, 2008 - Springer
Background The use of clustering methods for the discovery of cancer subtypes has drawn a
great deal of attention in the scientific community. While bioinformaticians have proposed …

Clust: automatic extraction of optimal co-expressed gene clusters from gene expression data

B Abu-Jamous, S Kelly - Genome biology, 2018 - Springer
Identifying co-expressed gene clusters can provide evidence for genetic or physical
interactions. Thus, co-expression clustering is a routine step in large-scale analyses of gene …

[HTML][HTML] Julia language in machine learning: Algorithms, applications, and open issues

K Gao, G Mei, F Piccialli, S Cuomo, J Tu… - Computer Science Review, 2020 - Elsevier
Abstract Machine learning is driving development across many fields in science and
engineering. A simple and efficient programming language could accelerate applications of …

Challenges in biomarker discovery: combining expert insights with statistical analysis of complex omics data

JE McDermott, J Wang, H Mitchell… - Expert opinion on …, 2013 - Taylor & Francis
Introduction: The advent of high throughput technologies capable of comprehensive
analysis of genes, transcripts, proteins and other significant biological molecules has …