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The application of long-read sequencing to cancer
Simple Summary Cancer is a complex disease caused by a slew of genetic mutations
discovered through advances in sequencing technologies such as next-generation …
discovered through advances in sequencing technologies such as next-generation …
k-mer approaches for biodiversity genomics
The wide array of currently available genomes displays a wonderful diversity in size,
composition, and structure and is quickly expanding thanks to several global biodiversity …
composition, and structure and is quickly expanding thanks to several global biodiversity …
LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads
Tandem repeats are frequent across the human genome, and variation in repeat length has
been linked to a variety of traits. Recent improvements in long read sequencing …
been linked to a variety of traits. Recent improvements in long read sequencing …
Telomere-to-telomere phased genome assembly using HERRO-corrected simplex Nanopore reads
Telomere-to-telomere phased assemblies have become the norm in genomics. To achieve
these for diploid and even polyploid genomes, the contemporary approach involves a …
these for diploid and even polyploid genomes, the contemporary approach involves a …
Telomere-to-telomere assembly by preserving contained reads
Automated telomere-to-telomere (T2T) de novo assembly of diploid and polyploid genomes
remains a formidable task. A string graph is a commonly used assembly graph …
remains a formidable task. A string graph is a commonly used assembly graph …
Evaluating data requirements for high-quality haplotype-resolved genomes for creating robust pangenome references
Long-read technologies from Pacific Biosciences (PacBio) and Oxford Nanopore
Technologies (ONT) have transformed genomics research by providing diverse data types …
Technologies (ONT) have transformed genomics research by providing diverse data types …
Effects of Food Concentration and Light Intensity on the Growth of a Model Coral
TY Fan, YL Huang, A Mayfield - Oceans, 2024 - mdpi.com
Since reef-building corals rely on both heterotrophy and endosymbiotic dinoflagellate
autotrophy to meet their metabolic needs, it is necessary to consider both food supply and …
autotrophy to meet their metabolic needs, it is necessary to consider both food supply and …
Special Issue “Bioinformatics of Unusual DNA and RNA Structures”
Nucleic acids are not only static carriers of genetic information but also play vital roles in
controlling cellular lifecycles through their fascinating structural diversity. Gone are the days …
controlling cellular lifecycles through their fascinating structural diversity. Gone are the days …
[HTML][HTML] Cost-Effective Detection of SNPs and Structural Variations in Full-Length Genes of Wheat and Sunflower Using Multiplex PCR and Rapid Nanopore Kit
E Polkhovskaya, E Moskalev, P Merkulov, K Dudnikova… - Biology, 2025 - mdpi.com
The rapid identification of allele variants in target genes is crucial for accelerating marker-
assisted selection (MAS) in plant breeding. Although current high-throughput genoty** …
assisted selection (MAS) in plant breeding. Although current high-throughput genoty** …
Measuring DNA contents of animal and plant genomes with Gnodes, the long and short of it
DG Gilbert - bioRxiv, 2024 - biorxiv.org
Measurement of DNA contents of genomes is valuable for understanding genome biology,
including assessments of genome assemblies, but it is not a trivial problem. Measuring …
including assessments of genome assemblies, but it is not a trivial problem. Measuring …