Klumpy: A tool to evaluate the integrity of long‐read genome assemblies and illusive sequence motifs

G Madrigal, BF Minhas… - Molecular ecology …, 2025 - Wiley Online Library
The improvement and decreasing costs of third‐generation sequencing technologies has
widened the scope of biological questions researchers can address with de novo genome …

[HTML][HTML] Exploring new genomic territories with emerging model insects

R Feron, RM Waterhouse - Current Opinion in Insect Science, 2022 - Elsevier
Highlights•New genome resources are expanding possibilities for develo** insect model
systems.•The quality of genome assemblies varies in contiguity and gene content …

Mitochondrial phylogenomics of bumblebees, Bombus (Hymenoptera: Apidae): a tale of structural variation, shifts in selection constraints, and tree discordance

LT Gonçalves, E Françoso… - Zoological Journal of the …, 2024 - academic.oup.com
The mitochondrial DNA (mtDNA) of bumblebees (Bombus) has been widely used for
phylogenetic studies, but its evolution is still underexplored. Here we report a …

Chromosome-Level Assembly and Annotation of the Genome of the Endangered Giant Patagonian Bumble Bee Bombus dahlbomii

L Martínez, EE Zattara, MP Arbetman… - Genome Biology and …, 2024 - academic.oup.com
This article describes a genome assembly and annotation for Bombus dahlbomii, the giant
Patagonian bumble bee. DNA from a single, haploid male collected in Argentina was used …

The genome sequence of the Tree Bumblebee, Bombus hypnorum (Linnaeus, 1758)

L Crowley, O Sivell… - Wellcome Open …, 2023 - wellcomeopenresearch.org
We present a genome assembly from an individual male Bombus hypnorum (the Tree
Bumblebee; Arthropoda; Insecta; Hymenoptera; Apidae). The genome sequence is 297 …

The genome sequence of the Large Red Tailed Bumble Bee, Bombus lapidarius (Linnaeus, 1758)

O Sivell, D Sivell, MN Smith… - Wellcome Open …, 2025 - wellcomeopenresearch.org
We present a genome assembly from an individual female specimen of Bombus lapidarius
(Large Red Tailed Bumble Bee; Arthropoda; Insecta; Hymenoptera; Apidae). The genome …

[PDF][PDF] with reservations

L Crowley, O Sivell - 2023 - researchgate.net
We present a genome assembly from an individual male Bombus hypnorum (the Tree
Bumblebee; Arthropoda; Insecta; Hymenoptera; Apidae). The genome sequence is 297 …