Ribosomal ITS sequences and plant phylogenetic inference

I Álvarez, JF Wendel - Molecular phylogenetics and evolution, 2003 - Elsevier
One of the most popular sequences for phylogenetic inference at the generic and
infrageneric levels in plants is the internal transcribed spacer (ITS) region of the 18S–5.8 S …

Characterization of angiosperm nrDNA polymorphism, paralogy, and pseudogenes

CD Bailey, TG Carr, SA Harris, CE Hughes - Molecular phylogenetics and …, 2003 - Elsevier
Many early reports of ITS region (ITS 1, 5.8 S, and ITS 2) variation in flowering plants
indicated that nrDNA arrays within individuals are homogeneous. However, both older and …

DNA barcoding for the discrimination of Eurasian yews (Taxus L., Taxaceae) and the discovery of cryptic species

JIE Liu, M Moeller, LM GAO… - Molecular ecology …, 2011 - Wiley Online Library
There is currently international interest in the application of DNA barcoding as a tool for plant
species discrimination and identification. In this study, we evaluated the utility of five …

Phylogeny and divergence times in Pinaceae: evidence from three genomes

XQ Wang, DC Tank, T Sang - Molecular Biology and Evolution, 2000 - academic.oup.com
In Pinaceae, the chloroplast, mitochondrial, and nuclear genomes are paternally, maternally,
and biparentally inherited, respectively. Examining congruence and incongruence of gene …

The Douglas-fir genome sequence reveals specialization of the photosynthetic apparatus in Pinaceae

DB Neale, PE McGuire, NC Wheeler… - G3: Genes …, 2017 - academic.oup.com
A reference genome sequence for Pseudotsuga menziesii var. menziesii (Mirb.) Franco
(Coastal Douglas-fir) is reported, thus providing a reference sequence for a third genus of …

Phylogenetic relationships, possible ancient hybridization, and biogeographic history of Abies (Pinaceae) based on data from nuclear, plastid, and mitochondrial …

QP **ang, R Wei, YZ Shao, ZY Yang, XQ Wang… - Molecular Phylogenetics …, 2015 - Elsevier
Abies, the second largest genus of Pinaceae, consists of approximately 48 species
occurring in the north temperate region. Previous molecular phylogenetic studies improved …

Complete organelle genomes of Korean fir, Abies koreana and phylogenomics of the gymnosperm genus Abies using nuclear and cytoplasmic DNA sequence data

S Park, M Kwak, SJ Park - Scientific Reports, 2024 - nature.com
Abies koreana EH Wilson is an endangered evergreen coniferous tree that is native to high
altitudes in South Korea and susceptible to the effects of climate change. Hybridization and …

Phylogeography of Douglas‐fir based on mitochondrial and chloroplast DNA sequences: testing hypotheses from the fossil record

PF Gugger, S Sugita… - Molecular …, 2010 - Wiley Online Library
The integration of fossil and molecular data can provide a synthetic understanding of the
ecological and evolutionary history of an organism. We analysed range‐wide maternally …

Cytoplasmic DNA variation and biogeography of Larix Mill. in Northeast Asia

MA Polezhaeva, M Lascoux… - Molecular Ecology, 2010 - Wiley Online Library
Range‐wide variation in 54 populations of Dahurian larch (Larix gmelinii) and related taxa
in Northeast Asia was assessed with four mitochondrial PCR‐RFLP and five chloroplast …

Southward Pleistocene migration of Douglas‐fir into Mexico: phylogeography, ecological niche modeling, and conservation of 'rear edge'populations

PF Gugger, A González‐Rodríguez… - New …, 2011 - Wiley Online Library
Poleward Pleistocene plant migration has been an important process structuring modern
temperate and boreal plant communities, but the contribution of equatorward migration …