Genome dynamics during experimental evolution
Evolutionary changes in organismal traits may occur either gradually or suddenly. However,
until recently, there has been little direct information about how phenotypic changes are …
until recently, there has been little direct information about how phenotypic changes are …
Life is physics: evolution as a collective phenomenon far from equilibrium
N Goldenfeld, C Woese - Annu. Rev. Condens. Matter Phys., 2011 - annualreviews.org
Evolution is the fundamental physical process that gives rise to biological phenomena. Yet it
is widely treated as a subset of population genetics, and thus its scope is artificially limited …
is widely treated as a subset of population genetics, and thus its scope is artificially limited …
Polyploidy can drive rapid adaptation in yeast
Polyploidy is observed across the tree of life, yet its influence on evolution remains
incompletely understood,,,. Polyploidy, usually whole-genome duplication, is proposed to …
incompletely understood,,,. Polyploidy, usually whole-genome duplication, is proposed to …
Genomic analysis of a key innovation in an experimental Escherichia coli population
Evolutionary novelties have been important in the history of life, but their origins are usually
difficult to examine in detail. We previously described the evolution of a novel trait, aerobic …
difficult to examine in detail. We previously described the evolution of a novel trait, aerobic …
Genomically encoded analog memory with precise in vivo DNA writing in living cell populations
Introduction The conversion of transient information into long-lasting responses is a common
aspect of many biological processes and is crucial for the design of sophisticated synthetic …
aspect of many biological processes and is crucial for the design of sophisticated synthetic …
Rapid generation of potent antibodies by autonomous hypermutation in yeast
The predominant approach for antibody generation remains animal immunization, which
can yield exceptionally selective and potent antibody clones owing to the powerful …
can yield exceptionally selective and potent antibody clones owing to the powerful …
Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures
Advances in sequencing technologies have enabled the identification of mutations acquired
by bacterial pathogens during infection,,,,,,,,,. However, it remains unclear whether adaptive …
by bacterial pathogens during infection,,,,,,,,,. However, it remains unclear whether adaptive …
Second-Order Selection for Evolvability in a Large Escherichia coli Population
In theory, competition between asexual lineages can lead to second-order selection for
greater evolutionary potential. To test this hypothesis, we revived a frozen population of …
greater evolutionary potential. To test this hypothesis, we revived a frozen population of …
Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations
When large asexual populations adapt, competition between simultaneously segregating
mutations slows the rate of adaptation and restricts the set of mutations that eventually fix …
mutations slows the rate of adaptation and restricts the set of mutations that eventually fix …
Genetic variation and the fate of beneficial mutations in asexual populations
The fate of a newly arising beneficial mutation depends on many factors, such as the
population size and the availability and fitness effects of other mutations that accumulate in …
population size and the availability and fitness effects of other mutations that accumulate in …