Protein dynamics and function from solution state NMR spectroscopy
It is well-established that dynamics are central to protein function; their importance is
implicitly acknowledged in the principles of the Monod, Wyman and Changeux model of …
implicitly acknowledged in the principles of the Monod, Wyman and Changeux model of …
Paramagnetic tagging of diamagnetic proteins for solution NMR
F Rodriguez‐Castañeda, P Haberz… - Magnetic …, 2006 - Wiley Online Library
In this article, approaches towards the paramagnetic tagging of diamagnetic proteins are
reviewed. Alignment can be achieved by adding paramagnetic fusion proteins or peptides to …
reviewed. Alignment can be achieved by adding paramagnetic fusion proteins or peptides to …
Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution
Protein dynamics are essential for protein function, and yet it has been challenging to
access the underlying atomic motions in solution on nanosecond-to-microsecond time …
access the underlying atomic motions in solution on nanosecond-to-microsecond time …
Predicting the locations of cryptic pockets from single protein structures using the PocketMiner graph neural network
Cryptic pockets expand the scope of drug discovery by enabling targeting of proteins
currently considered undruggable because they lack pockets in their ground state structures …
currently considered undruggable because they lack pockets in their ground state structures …
Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins
A molecular-level understanding of the function of a protein requires knowledge of both its
structural and dynamic properties. NMR spectroscopy allows the measurement of …
structural and dynamic properties. NMR spectroscopy allows the measurement of …
Quantitative analysis of protein backbone dynamics in microcrystalline ubiquitin by solid-state NMR spectroscopy
Characterization of protein dynamics by solid-state NMR spectroscopy requires robust and
accurate measurement protocols, which are not yet fully developed. In this study, we …
accurate measurement protocols, which are not yet fully developed. In this study, we …
Correlated motions are a fundamental property of β-sheets
Correlated motions in proteins can mediate fundamental biochemical processes such as
signal transduction and allostery. The mechanisms that underlie these processes remain …
signal transduction and allostery. The mechanisms that underlie these processes remain …
Self-consistent residual dipolar coupling based model-free analysis for the robust determination of nanosecond to microsecond protein dynamics
Residual dipolar couplings (RDCs) provide information about the dynamic average
orientation of inter-nuclear vectors and amplitudes of motion up to milliseconds. They …
orientation of inter-nuclear vectors and amplitudes of motion up to milliseconds. They …
Exact distances and internal dynamics of perdeuterated ubiquitin from NOE buildups
It is proposed to convert nuclear Overhauser effects (NOEs) into relatively precise distances
for detailed structural studies of proteins. To this purpose, it is demonstrated that the …
for detailed structural studies of proteins. To this purpose, it is demonstrated that the …
Recent advances in solid-state relaxation dispersion techniques
P Rovo - Solid State Nuclear Magnetic Resonance, 2020 - Elsevier
This review describes two rotating-frame (R 1 ρ) relaxation dispersion methods, namely the
Bloch-McConnell Relaxation Dispersion and the Near-rotary Resonance Relaxation …
Bloch-McConnell Relaxation Dispersion and the Near-rotary Resonance Relaxation …