A survey of methods for 3D histology reconstruction

J Pichat, JE Iglesias, T Yousry, S Ourselin… - Medical image analysis, 2018 - Elsevier
Histology permits the observation of otherwise invisible structures of the internal topography
of a specimen. Although it enables the investigation of tissues at a cellular level, it is invasive …

Breast cancer detection based on simplified deep learning technique with histopathological image using BreaKHis database

TA Toma, S Biswas, MS Miah… - Radio …, 2023 - ieeexplore.ieee.org
Presented here are the results of an investigation conducted to determine the effectiveness
of deep learning (DL)-based systems utilizing the power of transfer learning for detecting …

Utilizing 3D head and neck specimen scanning for intraoperative margin discussions: proof of concept of our novel approach

MP Saturno, M Brandwein‐Weber, L Greenberg… - Head & …, 2023 - Wiley Online Library
Background The current standard of documenting and communicating frozen section margin
results is inefficient. We present a novel method of generating 3D digital models of gross …

Map** histological slice sequences to the allen mouse brain atlas without 3D reconstruction

J **ong, J Ren, L Luo, M Horowitz - Frontiers in neuroinformatics, 2018 - frontiersin.org
Histological brain slices are widely used in neuroscience to study the anatomical
organization of neural circuits. Systematic and accurate comparisons of anatomical data …

A multimodal computational pipeline for 3D histology of the human brain

M Mancini, A Casamitjana, L Peter, E Robinson… - Scientific reports, 2020 - nature.com
Ex vivo imaging enables analysis of the human brain at a level of detail that is not possible
in vivo with MRI. In particular, histology can be used to study brain tissue at the microscopic …

Three-dimensional imaging and analysis of pathological tissue samples with de novo generation of citrate-based fluorophores

J Pac, DJ Koo, H Cho, D Jung, M Choi, Y Choi… - Science …, 2022 - science.org
Two-dimensional (2D) histopathology based on the observation of thin tissue slides is the
current paradigm in diagnosis and prognosis. However, labeling strategies in conventional …

VERDICT MRI validation in fresh and fixed prostate specimens using patient‐specific moulds for histological and MR alignment

C Bailey, RM Bourne, B Siow, EW Johnston… - NMR in …, 2019 - Wiley Online Library
The VERDICT framework for modelling diffusion MRI data aims to relate parameters from a
biophysical model to histological features used for tumour grading in prostate cancer …

A new method of artificial-intelligence-based automatic identification of lymphovascular invasion in urothelial carcinomas

B Ceachi, M Cioplea, P Mustatea, J Gerald Dcruz… - Diagnostics, 2024 - mdpi.com
The presence of lymphovascular invasion (LVI) in urothelial carcinoma (UC) is a poor
prognostic finding. This is difficult to identify on routine hematoxylin–eosin (H&E)-stained …

Three-dimensional bioprinting of anatomically realistic tissue constructs for disease modeling and drug testing

NI Moldovan - Tissue Engineering Part C: Methods, 2021 - liebertpub.com
Three-dimensional (3D) bioprinting is an emerging tissue engineering technology, already
with several remarkable accomplishments and with more promises to fulfill. Besides the …

[HTML][HTML] Three-dimensional presentation of tumor histopathology: A model using tongue squamous cell carcinoma

A Koivuholma, K Aro, A Mäkitie, M Salmi, T Mirtti… - Diagnostics, 2021 - mdpi.com
Medical imaging often presents objects in three-dimensional (3D) form to provide better
visual understanding. In contrast, histopathology is typically presented as two-dimensional …