Deciphering bacterial mechanisms of root colonization
Bacterial colonization of the rhizosphere is critical for the establishment of plant–bacteria
interactions that represent a key determinant of plant health and productivity. Plants …
interactions that represent a key determinant of plant health and productivity. Plants …
FPbase: a community-editable fluorescent protein database
TJ Lambert - Nature methods, 2019 - nature.com
To the Editor—The cloning and subsequent engineering of fluorescent proteins (FPs) has
revolutionized methods in biological research1, 2. There are now thousands of FPs …
revolutionized methods in biological research1, 2. There are now thousands of FPs …
Positive interactions are common among culturable bacteria
Interspecies interactions shape the structure and function of microbial communities. In
particular, positive, growth-promoting interactions can substantially affect the diversity and …
particular, positive, growth-promoting interactions can substantially affect the diversity and …
Strategies for improving small-molecule biosensors in bacteria
In recent years, small-molecule biosensors have become increasingly important in synthetic
biology and biochemistry, with numerous new applications continuing to be developed …
biology and biochemistry, with numerous new applications continuing to be developed …
Phyllosphere symbiont promotes plant growth through ACC deaminase production
Plant growth promoting bacteria can confer resistance to various types of stress and
increase agricultural yields. The mechanisms they employ are diverse. One of the most …
increase agricultural yields. The mechanisms they employ are diverse. One of the most …
Cross-feeding niches among commensal leaf bacteria are shaped by the interaction of strain-level diversity and resource availability
M Murillo-Roos, HSM Abdullah, M Debbar… - The ISME …, 2022 - academic.oup.com
Leaf microbiomes play crucial roles in plant health, making it important to understand the
origins and functional relevance of their diversity. High strain-level leaf bacterial genetic …
origins and functional relevance of their diversity. High strain-level leaf bacterial genetic …
Diverse and abundant phages exploit conjugative plasmids
Phages exert profound evolutionary pressure on bacteria by interacting with receptors on
the cell surface to initiate infection. While the majority of phages use chromosomally …
the cell surface to initiate infection. While the majority of phages use chromosomally …
The use of synthetic microbial communities to improve plant health
Despite the numerous benefits plants receive from probiotics, maintaining consistent results
across applications is still a challenge. Cultivation-independent methods associated with …
across applications is still a challenge. Cultivation-independent methods associated with …
Dual-expression system for blue fluorescent protein optimization
Spectrally diverse fluorescent proteins (FPs) provide straightforward means for multiplexed
imaging of biological systems. Among FPs fitting standard color channels, blue FPs (BFPs) …
imaging of biological systems. Among FPs fitting standard color channels, blue FPs (BFPs) …
Stable, fluorescent markers for tracking synthetic communities and assembly dynamics
Background After two decades of extensive microbiome research, the current forefront of
scientific exploration involves moving beyond description and classification to uncovering …
scientific exploration involves moving beyond description and classification to uncovering …