Graph neural networks for materials science and chemistry

P Reiser, M Neubert, A Eberhard, L Torresi… - Communications …, 2022 - nature.com
Abstract Machine learning plays an increasingly important role in many areas of chemistry
and materials science, being used to predict materials properties, accelerate simulations …

Geometric deep learning on molecular representations

K Atz, F Grisoni, G Schneider - Nature Machine Intelligence, 2021 - nature.com
Geometric deep learning (GDL) is based on neural network architectures that incorporate
and process symmetry information. GDL bears promise for molecular modelling applications …

Illuminating protein space with a programmable generative model

JB Ingraham, M Baranov, Z Costello, KW Barber… - Nature, 2023 - nature.com
Three billion years of evolution has produced a tremendous diversity of protein molecules,
but the full potential of proteins is likely to be much greater. Accessing this potential has …

MACE: Higher order equivariant message passing neural networks for fast and accurate force fields

I Batatia, DP Kovacs, G Simm… - Advances in neural …, 2022 - proceedings.neurips.cc
Creating fast and accurate force fields is a long-standing challenge in computational
chemistry and materials science. Recently, Equivariant Message Passing Neural Networks …

Spherical fourier neural operators: Learning stable dynamics on the sphere

B Bonev, T Kurth, C Hundt, J Pathak… - International …, 2023 - proceedings.mlr.press
Abstract Fourier Neural Operators (FNOs) have proven to be an efficient and effective
method for resolution-independent operator learning in a broad variety of application areas …

Eqmotion: Equivariant multi-agent motion prediction with invariant interaction reasoning

C Xu, RT Tan, Y Tan, S Chen… - Proceedings of the …, 2023 - openaccess.thecvf.com
Learning to predict agent motions with relationship reasoning is important for many
applications. In motion prediction tasks, maintaining motion equivariance under Euclidean …

Dilateformer: Multi-scale dilated transformer for visual recognition

J Jiao, YM Tang, KY Lin, Y Gao, AJ Ma… - IEEE Transactions …, 2023 - ieeexplore.ieee.org
As a de facto solution, the vanilla Vision Transformers (ViTs) are encouraged to model long-
range dependencies between arbitrary image patches while the global attended receptive …

Equibind: Geometric deep learning for drug binding structure prediction

H Stärk, O Ganea, L Pattanaik… - International …, 2022 - proceedings.mlr.press
Predicting how a drug-like molecule binds to a specific protein target is a core problem in
drug discovery. An extremely fast computational binding method would enable key …

Pure transformers are powerful graph learners

J Kim, D Nguyen, S Min, S Cho… - Advances in Neural …, 2022 - proceedings.neurips.cc
We show that standard Transformers without graph-specific modifications can lead to
promising results in graph learning both in theory and practice. Given a graph, we simply …

Physics-informed machine learning: A survey on problems, methods and applications

Z Hao, S Liu, Y Zhang, C Ying, Y Feng, H Su… - arxiv preprint arxiv …, 2022 - arxiv.org
Recent advances of data-driven machine learning have revolutionized fields like computer
vision, reinforcement learning, and many scientific and engineering domains. In many real …