Major depressive disorder

W Marx, BWJH Penninx, M Solmi… - Nature Reviews …, 2023 - nature.com
Major depressive disorder (MDD) is characterized by persistent depressed mood, loss of
interest or pleasure in previously enjoyable activities, recurrent thoughts of death, and …

Graph neural networks for materials science and chemistry

P Reiser, M Neubert, A Eberhard, L Torresi… - Communications …, 2022 - nature.com
Abstract Machine learning plays an increasingly important role in many areas of chemistry
and materials science, being used to predict materials properties, accelerate simulations …

Graph neural networks: foundation, frontiers and applications

L Wu, P Cui, J Pei, L Zhao, X Guo - … of the 28th ACM SIGKDD Conference …, 2022 - dl.acm.org
The field of graph neural networks (GNNs) has seen rapid and incredible strides over the
recent years. Graph neural networks, also known as deep learning on graphs, graph …

Building a knowledge graph to enable precision medicine

P Chandak, K Huang, M Zitnik - Scientific Data, 2023 - nature.com
Develo** personalized diagnostic strategies and targeted treatments requires a deep
understanding of disease biology and the ability to dissect the relationship between …

Graph self-supervised learning: A survey

Y Liu, M **, S Pan, C Zhou, Y Zheng… - IEEE transactions on …, 2022 - ieeexplore.ieee.org
Deep learning on graphs has attracted significant interests recently. However, most of the
works have focused on (semi-) supervised learning, resulting in shortcomings including …

[HTML][HTML] Geometry-enhanced molecular representation learning for property prediction

X Fang, L Liu, J Lei, D He, S Zhang, J Zhou… - Nature Machine …, 2022 - nature.com
Effective molecular representation learning is of great importance to facilitate molecular
property prediction. Recent advances for molecular representation learning have shown …

Molecular contrastive learning of representations via graph neural networks

Y Wang, J Wang, Z Cao… - Nature Machine …, 2022 - nature.com
Molecular machine learning bears promise for efficient molecular property prediction and
drug discovery. However, labelled molecule data can be expensive and time consuming to …

Unravelling the collateral damage of antibiotics on gut bacteria

L Maier, CV Goemans, J Wirbel, M Kuhn, C Eberl… - Nature, 2021 - nature.com
Antibiotics are used to fight pathogens but also target commensal bacteria, disturbing the
composition of gut microbiota and causing dysbiosis and disease. Despite this well-known …

Pre-training molecular graph representation with 3d geometry

S Liu, H Wang, W Liu, J Lasenby, H Guo… - arxiv preprint arxiv …, 2021 - arxiv.org
Molecular graph representation learning is a fundamental problem in modern drug and
material discovery. Molecular graphs are typically modeled by their 2D topological …

Knowledge graph-enhanced molecular contrastive learning with functional prompt

Y Fang, Q Zhang, N Zhang, Z Chen, X Zhuang… - Nature Machine …, 2023 - nature.com
Deep learning models can accurately predict molecular properties and help making the
search for potential drug candidates faster and more efficient. Many existing methods are …