Measuring and interpreting transposable element expression

S Lanciano, G Cristofari - Nature Reviews Genetics, 2020 - nature.com
Transposable elements (TEs) are insertional mutagens that contribute greatly to the
plasticity of eukaryotic genomes, influencing the evolution and adaptation of species as well …

Transposable elements in cancer

KH Burns - Nature Reviews Cancer, 2017 - nature.com
Transposable elements give rise to interspersed repeats, sequences that comprise most of
our genomes. These mobile DNAs have been historically underappreciated—both because …

The impact of retrotransposons on human genome evolution

R Cordaux, MA Batzer - Nature reviews genetics, 2009 - nature.com
Their ability to move within genomes gives transposable elements an intrinsic propensity to
affect genome evolution. Non-long terminal repeat (LTR) retrotransposons—including LINE …

The influence of LINE‐1 and SINE retrotransposons on mammalian genomes

SR Richardson, AJ Doucet, HC Kopera… - Mobile DNA …, 2015 - Wiley Online Library
Transposable elements (TEs) or “jum** genes” historically have been disparaged as a
class of “junk DNA” in mammalian genomes (1, 2). The advent of whole genome DNA …

LINE-1 retrotransposition activity in human genomes

CR Beck, P Collier, C Macfarlane, M Malig, JM Kidd… - Cell, 2010 - cell.com
Summary Highly active (ie," hot") long interspersed element-1 (LINE-1 or L1) sequences
comprise the bulk of retrotransposition activity in the human genome; however, the …

LINE-1 elements in structural variation and disease

CR Beck, JL Garcia-Perez, RM Badge… - Annual review of …, 2011 - annualreviews.org
The completion of the human genome reference sequence ushered in a new era for the
study and discovery of human transposable elements. It now is undeniable that …

Our conflict with transposable elements and its implications for human disease

KH Burns - Annual Review of Pathology: Mechanisms of …, 2020 - annualreviews.org
Our genome is a historic record of successive invasions of mobile genetic elements. Like
other eukaryotes, we have evolved mechanisms to limit their propagation and minimize the …

High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes

AD Ewing, HH Kazazian - Genome research, 2010 - genome.cshlp.org
Using high-throughput sequencing, we devised a technique to determine the insertion sites
of virtually all members of the human-specific L1 retrotransposon family in any human …

[HTML][HTML] Mobile interspersed repeats are major structural variants in the human genome

CRL Huang, AM Schneider, Y Lu, T Niranjan, P Shen… - Cell, 2010 - cell.com
Characterizing structural variants in the human genome is of great importance, but a
genome wide analysis to detect interspersed repeats has not been done. Thus, the degree …

Response of transposable elements to environmental stressors

IR Miousse, MCG Chalbot, A Lumen… - … Research/Reviews in …, 2015 - Elsevier
Transposable elements (TEs) comprise a group of repetitive sequences that bring positive,
negative, as well as neutral effects to the host organism. Earlier considered as “junk DNA,” …