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[HTML][HTML] The evolutionary and ecological potential of yeast hybrids
Recent findings in yeast genetics and genomics have advanced our understanding of the
evolutionary potential unlocked by hybridization, especially in the genus Saccharomyces …
evolutionary potential unlocked by hybridization, especially in the genus Saccharomyces …
Role of genetic architecture in phenotypic plasticity
Phenotypic plasticity, the ability of an organism to display different phenotypes across
environments, is widespread in nature. Plasticity aids survival in novel environments …
environments, is widespread in nature. Plasticity aids survival in novel environments …
Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data
The emergence of microbial antibiotic resistance is a global health threat. In clinical settings,
the key to controlling spread of resistant strains is accurate and rapid detection. As …
the key to controlling spread of resistant strains is accurate and rapid detection. As …
[HTML][HTML] Contrasting evolutionary genome dynamics between domesticated and wild yeasts
Structural rearrangements have long been recognized as an important source of genetic
variation, with implications in phenotypic diversity and disease, yet their detailed …
variation, with implications in phenotypic diversity and disease, yet their detailed …
The interplay of additivity, dominance, and epistasis on fitness in a diploid yeast cross
In diploid species, genetic loci can show additive, dominance, and epistatic effects. To
characterize the contributions of these different types of genetic effects to heritable traits, we …
characterize the contributions of these different types of genetic effects to heritable traits, we …
Scan-o-matic: high-resolution microbial phenomics at a massive scale
M Zackrisson, J Hallin, LG Ottosson… - G3: Genes …, 2016 - academic.oup.com
The capacity to map traits over large cohorts of individuals—phenomics—lags far behind the
explosive development in genomics. For microbes, the estimation of growth is the key …
explosive development in genomics. For microbes, the estimation of growth is the key …
Natural variants suppress mutations in hundreds of essential genes
L Parts, A Batté, M Lopes, MW Yuen… - Molecular Systems …, 2021 - embopress.org
The consequence of a mutation can be influenced by the context in which it operates. For
example, loss of gene function may be tolerated in one genetic background, and lethal in …
example, loss of gene function may be tolerated in one genetic background, and lethal in …
Interaction models matter: an efficient, flexible computational framework for model-specific investigation of epistasis
Purpose Epistasis, the interaction between two or more genes, is integral to the study of
genetics and is present throughout nature. Yet, it is seldom fully explored as most …
genetics and is present throughout nature. Yet, it is seldom fully explored as most …
Accurate tracking of the mutational landscape of diploid hybrid genomes
Mutations, recombinations, and genome duplications may promote genetic diversity and
trigger evolutionary processes. However, quantifying these events in diploid hybrid …
trigger evolutionary processes. However, quantifying these events in diploid hybrid …
Epistasis: searching for interacting genetic variants using crosses
IM Ehrenreich - Genetics, 2017 - academic.oup.com
Within quantitative genetics, the term “epistasis” is used to broadly describe situations in
which combinations of genetic variants show nonadditive phenotypic effects (Phillips 1998 …
which combinations of genetic variants show nonadditive phenotypic effects (Phillips 1998 …