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Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
The ribosomal-RNA (rRNA) approach to microbial evolution and ecology has become an
integral part of environmental microbiology. Based on the patchy conservation of rRNA …
integral part of environmental microbiology. Based on the patchy conservation of rRNA …
Fluorescence in situ hybridization for the detection of prokaryotes
Determining the structure and dynamics of microbial communities is a core component of
microbial ecology. Traditionally, microbiologists used timeconsuming cultivation-based …
microbial ecology. Traditionally, microbiologists used timeconsuming cultivation-based …
Basidiomycete yeasts in the cortex of ascomycete macrolichens
For over 140 years, lichens have been regarded as a symbiosis between a single fungus,
usually an ascomycete, and a photosynthesizing partner. Other fungi have long been known …
usually an ascomycete, and a photosynthesizing partner. Other fungi have long been known …
SAR11 clade dominates ocean surface bacterioplankton communities
The most abundant class of bacterial ribosomal RNA genes detected in seawater DNA by
gene cloning belongs to SAR11—an α-proteobacterial clade. Other than indications of their …
gene cloning belongs to SAR11—an α-proteobacterial clade. Other than indications of their …
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria
Fluorescence in situ hybridization (FISH) with horseradish peroxidase (HRP)-labeled
oligonucleotide probes and tyramide signal amplification, also known as catalyzed reporter …
oligonucleotide probes and tyramide signal amplification, also known as catalyzed reporter …
Identification of active denitrifiers in full‐scale nutrient removal wastewater treatment systems
SJ McIlroy, A Starnawska, P Starnawski… - Environmental …, 2016 - Wiley Online Library
Denitrification is essential to the removal of nitrogen from wastewater during treatment, yet
an understanding of the diversity of the active denitrifying bacteria responsible in full‐scale …
an understanding of the diversity of the active denitrifying bacteria responsible in full‐scale …
Discovery of novel intermediate forms redefines the fungal tree of life
Fungi are the principal degraders of biomass in terrestrial ecosystems and establish
important interactions with plants and animals,,. However, our current understanding of …
important interactions with plants and animals,,. However, our current understanding of …
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities
This study describes reconstruction of two highly unusual archaeal genomes by de novo
metagenomic assembly of multiple, deeply sequenced libraries from surface waters of Lake …
metagenomic assembly of multiple, deeply sequenced libraries from surface waters of Lake …
[LLIBRE][B] Manual of environmental microbiology
CJ Hurst, RL Crawford, JL Garland, DA Lipson - 2007 - books.google.com
The most definitive manual of microbes in air, water, and soil and their impact on human
health and welfare.• Incorporates a summary of the latest methodology used to study the …
health and welfare.• Incorporates a summary of the latest methodology used to study the …
Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria
FO Glöckner, E Zaichikov, N Belkova… - Applied and …, 2000 - Am Soc Microbiol
In a search for cosmopolitan phylogenetic clusters of freshwater bacteria, we recovered a
total of 190 full and partial 16S ribosomal DNA (rDNA) sequences from three different lakes …
total of 190 full and partial 16S ribosomal DNA (rDNA) sequences from three different lakes …