[HTML][HTML] Nanopore sequencing technology, bioinformatics and applications
Rapid advances in nanopore technologies for sequencing single long DNA and RNA
molecules have led to substantial improvements in accuracy, read length and throughput …
molecules have led to substantial improvements in accuracy, read length and throughput …
[HTML][HTML] Phylogenetic analysis of transmission dynamics of dengue in large and small population centers, Northern Ecuador
Although dengue is typically considered an urban disease, rural communities are also at
high risk. To clarify dynamics of dengue virus (DENV) transmission in settings with …
high risk. To clarify dynamics of dengue virus (DENV) transmission in settings with …
Lying in wait: the resurgence of dengue virus after the Zika epidemic in Brazil
After the Zika virus (ZIKV) epidemic in the Americas in 2016, both Zika and dengue
incidence declined to record lows in many countries in 2017–2018, but in 2019 dengue …
incidence declined to record lows in many countries in 2017–2018, but in 2019 dengue …
Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil
Brazil experienced a large dengue virus (DENV) epidemic in 2019, highlighting a
continuous struggle with effective control and public health preparedness. Using Oxford …
continuous struggle with effective control and public health preparedness. Using Oxford …
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing
IM Claro, MS Ramundo, TM Coletti… - Wellcome open …, 2023 - pmc.ncbi.nlm.nih.gov
Emerging and re-emerging viruses are a global health concern. Genome sequencing as an
approach for monitoring circulating viruses is currently hampered by complex and expensive …
approach for monitoring circulating viruses is currently hampered by complex and expensive …
Phylogenetics, epidemiology and temporal patterns of dengue virus in araraquara, são paulo state
Dengue virus (DENV) is a prominent arbovirus with global spread, causing approximately
390 million infections each year. In Brazil, yearly epidemics follow a well-documented …
390 million infections each year. In Brazil, yearly epidemics follow a well-documented …
Phylogenetic Reconstructions Reveal the Circulation of a Novel Dengue Virus-1V Clade and the Persistence of a Dengue Virus-2 III Genotype in Northeast Brazil
Dengue fever is among the most significant public health concerns in Brazil. To date, the
highest number of Dengue notifications in the Americas has been reported in Brazil, with …
highest number of Dengue notifications in the Americas has been reported in Brazil, with …
Viral metagenomics for the identification of emerging infections in clinical samples with inconclusive Dengue, Zika, and Chikungunya viral amplification
JVC Souza, HO Santos, AB Leite, M Giovanetti… - Viruses, 2022 - mdpi.com
Viral metagenomics is increasingly being used for the identification of emerging and re-
emerging viral pathogens in clinical samples with unknown etiology. The objective of this …
emerging viral pathogens in clinical samples with unknown etiology. The objective of this …
Nanopore-based metagenomic sequencing in respiratory tract infection: a develo** diagnostic platform
Respiratory tract infection (RTI) remains a significant cause of morbidity and mortality across
the globe. The optimal management of RTI relies upon timely pathogen identification via …
the globe. The optimal management of RTI relies upon timely pathogen identification via …
Genetic differences of dengue virus 2 in patients with distinct clinical outcome
B de Carvalho Marques, L Sacchetto, CA Banho… - Brazilian Journal of …, 2023 - Springer
The genetic diversity of the dengue virus is characterized by four circulating serotypes,
several genotypes, and an increasing number of existing lineages that may have differences …
several genotypes, and an increasing number of existing lineages that may have differences …