Epistasis and pleiotropy‐induced variation for plant breeding

SL Dwivedi, P Heslop‐Harrison, J Amas… - Plant Biotechnology …, 2024‏ - Wiley Online Library
Epistasis refers to nonallelic interaction between genes that cause bias in estimates of
genetic parameters for a phenotype with interactions of two or more genes affecting the …

Discovery and prioritization of variants and genes for kidney function in> 1.2 million individuals

KJ Stanzick, Y Li, P Schlosser, M Gorski… - Nature …, 2021‏ - nature.com
Genes underneath signals from genome-wide association studies (GWAS) for kidney
function are promising targets for functional studies, but prioritizing variants and genes is …

Pre-, pro-, and postbiotics development from vegetable, fruit, and lignocellulosic biomass: A perspective

L Bhatia, PK Sarangi, AK Singh, RK Srivastava… - Food Bioscience, 2024‏ - Elsevier
Fructooligosaccharides (FOS) are essential components found in various vegetal biomass
sources, including foods, agricultural residues, fruits, and vegetable waste. Comprising 3 to …

Plant myo-inositol transport influences bacterial colonization phenotypes

BS O'Banion, P Jones, AA Demetros, BR Kelley… - Current Biology, 2023‏ - cell.com
Plant microbiomes are assembled and modified through a complex milieu of biotic and
abiotic factors. Despite dynamic and fluctuating contributing variables, specific host …

Breeding for Climate Change Resilience: A Case Study of Loblolly Pine (Pinus taeda L.) in North America

LP Matallana-Ramirez, RW Whetten… - Frontiers in plant …, 2021‏ - frontiersin.org
Earth's atmosphere is warming and the effects of climate change are becoming evident. A
key observation is that both the average levels and the variability of temperature and …

Genome-Wide Association Study of Wood Anatomical and Morphological Traits in Populus trichocarpa

HB Chhetri, A Furches, D Macaya-Sanz… - Frontiers in plant …, 2020‏ - frontiersin.org
To understand the genetic mechanisms underlying wood anatomical and morphological
traits in Populus trichocarpa, we used 869 unrelated genotypes from a common garden in …

AgroLD: A knowledge graph for the plant sciences

P Larmande, K Todorov - International Semantic Web Conference, 2021‏ - Springer
Recent advances in sequencing technologies and high-throughput phenoty** have
revolutionized the analysis in the field of the plant sciences. However, there is an urgent …

Data integration in poplar:'omics layers and integration strategies

D Weighill, TJ Tschaplinski, GA Tuskan… - Frontiers in …, 2019‏ - frontiersin.org
Populus trichocarpa is an important biofuel feedstock that has been the target of extensive
research and is emerging as a model organism for plants, especially woody perennials. This …

A multi‐trait multi‐locus stepwise approach for conducting GWAS on correlated traits

SB Fernandes, TM Casstevens, PJ Bradbury… - The Plant …, 2022‏ - Wiley Online Library
The ability to accurately quantify the simultaneous effect of multiple genomic loci on multiple
traits is now possible due to current and emerging high‐throughput genoty** and …

[HTML][HTML] The promises, challenges, and opportunities of omics for studying the plant holobiont

DL Carper, MR Appidi, S Mudbhari, HK Shrestha… - Microorganisms, 2022‏ - mdpi.com
Microorganisms are critical drivers of biological processes that contribute significantly to
plant sustainability and productivity. In recent years, emerging research on plant holobiont …