Scalable replica-exchange framework for Wang-Landau sampling

T Vogel, YW Li, T Wüst, DP Landau - Physical Review E, 2014 - APS
We investigate a generic, parallel replica-exchange framework for Monte Carlo simulations
based on the Wang-Landau method. To demonstrate its advantages and general …

Thermal properties of knotted block copolymer rings with charged monomers subjected to short-range interactions

NA Taklimi, F Ferrari, MR Piątek, L Tubiana - Physical Review E, 2023 - APS
The thermal properties of coarse-grained knotted copolymer rings fluctuating in a highly
screening solution are investigated on a simple cubic lattice using the Wang-Landau Monte …

Semiflexible oligomers crystallize via a cooperative phase transition

P Kawak, DS Banks, DR Tree - The Journal of Chemical Physics, 2021 - pubs.aip.org
Semicrystalline polymers are ubiquitous, yet despite their fundamental and industrial
importance, the theory of homogeneous nucleation from a melt remains a subject of debate …

Large deviations of a susceptible-infected-recovered model around the epidemic threshold

Y Feld, AK Hartmann - Physical Review E, 2022 - APS
We numerically study the dynamics of the SIR disease model on small-world networks by
using a large-deviation approach. This allows us to obtain the probability density function of …

Steepest-Entropy-Ascent Framework for Predicting Arsenic Adsorption on Graphene Oxide Surfaces--A Case Study

A Saldana-Robles, C Damian… - arxiv preprint arxiv …, 2024 - arxiv.org
The steepest-entropy-ascent quantum thermodynamics (SEAQT) framework is employed to
describe the adsorption process of arsenic (V) onto graphene oxide both in and out of …

Model for Predicting Adsorption Isotherms and the Kinetics of Adsorption via Steepest-Entropy-Ascent Quantum Thermodynamics

A Saldana-Robles, C Damian, WT Reynolds Jr… - arxiv preprint arxiv …, 2024 - arxiv.org
This work outlines the foundations for being able to do a first-principle study of the
adsorption process using the steepest-entropy-ascent quantum thermodynamic (SEAQT) …

Predicting Polymer Brush Behavior in Solvents using the Steepest-Entropy-Ascent Quantum Thermodynamic Framework

J McDonald, MR von Spakovsky… - The Journal of …, 2023 - ACS Publications
The steepest-entropy-ascent quantum thermodynamic (SEAQT) framework is utilized to
study the effects of temperature on polymer brushes. The brushes are represented by a …

Predicting non-equilibrium folding behavior of polymer chains using the steepest-entropy-ascent quantum thermodynamic framework

J McDonald, MR von Spakovsky… - The Journal of Chemical …, 2023 - pubs.aip.org
The steepest-entropy-ascent quantum thermodynamic (SEAQT) framework is used to
explore the influence of heating and cooling on polymer chain folding kinetics. The …

Nonconvergence of the Wang-Landau algorithms with multiple random walkers

RE Belardinelli, VD Pereyra - Physical Review E, 2016 - APS
This paper discusses some convergence properties in the entropic sampling Monte Carlo
methods with multiple random walkers, particularly in the Wang-Landau (WL) and 1/t …

Non-analytic behaviour in large-deviations of the susceptible-infected-recovered model under the influence of lockdowns

LP Mulholland, Y Feld, AK Hartmann - New Journal of Physics, 2023 - iopscience.iop.org
We numerically investigate the dynamics of an SIR model with infection level-based
lockdowns on Small-World networks. Using a large-deviation approach, namely the Wang …