Protein analysis by shotgun/bottom-up proteomics
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
Mass spectrometry–based proteomics and network biology
In the life sciences, a new paradigm is emerging that places networks of interacting
molecules between genotype and phenotype. These networks are dynamically modulated …
molecules between genotype and phenotype. These networks are dynamically modulated …
Determining target engagement in living systems
Chemical probes are critical tools for elucidating the biological functions of proteins and can
lead to new medicines for treating disease. The pharmacological validation of protein …
lead to new medicines for treating disease. The pharmacological validation of protein …
Large-scale discovery of substrates of the human kinome
Kinase networks are important for cellular signal transduction. Despite tremendous efforts to
uncover these signaling pathways, huge numbers of uncharacterized phosphosites still …
uncover these signaling pathways, huge numbers of uncharacterized phosphosites still …
Application of targeted mass spectrometry in bottom-up proteomics for systems biology research
The enormous diversity of proteoforms produces tremendous complexity within cellular
proteomes, facilitates intricate networks of molecular interactions, and constitutes a …
proteomes, facilitates intricate networks of molecular interactions, and constitutes a …
Functional proteomics to dissect tyrosine kinase signalling pathways in cancer
Advances in the generation and interpretation of proteomics data have spurred a transition
from focusing on protein identification to functional analysis. Here we review recent …
from focusing on protein identification to functional analysis. Here we review recent …
[HTML][HTML] Phosphoproteomics in cancer
Reversible protein phosphorylation serves as a basis for regulating a number of cellular
processes. Aberrant activation of kinase signaling pathways is commonly associated with …
processes. Aberrant activation of kinase signaling pathways is commonly associated with …
Pathway-based identification of biomarkers for targeted therapeutics: personalized oncology with PI3K pathway inhibitors
Although we have made great progress in understanding the complex genetic alterations
that underlie human cancer, it has proven difficult to identify which molecularly targeted …
that underlie human cancer, it has proven difficult to identify which molecularly targeted …
Spatiotemporally resolved protein detection in live cells using nanopore biosensors
H Zhang, T Zhao, P Huang, Q Wang, H Tang, X Chu… - ACS …, 2022 - ACS Publications
Spatiotemporal detection of proteins in living cells is a persistent challenge but is the key to
understanding their cellular biology and develo** theranostic technologies. We develop a …
understanding their cellular biology and develo** theranostic technologies. We develop a …
The revolution and evolution of shotgun proteomics for large-scale proteome analysis
JR Yates III - Journal of the American Chemical Society, 2013 - ACS Publications
Mass spectrometry has evolved at an exponential rate over the last 100 years. Innovations in
the development of mass spectrometers have created powerful instruments capable of …
the development of mass spectrometers have created powerful instruments capable of …