Real-time PCR detection chemistry

E Navarro, G Serrano-Heras, MJ Castaño, J Solera - Clinica chimica acta, 2015 - Elsevier
Real-time PCR is the method of choice in many laboratories for diagnostic and food
applications. This technology merges the polymerase chain reaction chemistry with the use …

Efficiency correction is required for accurate quantitative PCR analysis and reporting

JM Ruijter, RJ Barnewall, IB Marsh… - Clinical …, 2021 - academic.oup.com
Abstract Background Quantitative PCR (qPCR) aims to measure the DNA or RNA
concentration in diagnostic and biological samples based on the quantification cycle (Cq) …

Anaerobic co-digestion of sewage sludge, food waste and yard waste: Synergistic enhancement on process stability and biogas production

L Mu, L Zhang, K Zhu, J Ma, M Ifran, A Li - Science of the Total Environment, 2020 - Elsevier
Anaerobic co-digestion (co-AD) could be a more sustainable waste management solution by
sharing the existed anaerobic digestion (AD) facilities and generating more biogas energy …

Web-based LinRegPCR: application for the visualization and analysis of (RT)-qPCR amplification and melting data

A Untergasser, JM Ruijter, V Benes… - BMC …, 2021 - Springer
Background The analyses of amplification and melting curves have been shown to provide
valuable information on the quality of the individual reactions in quantitative PCR (qPCR) …

[HTML][HTML] A survey of tools for the analysis of quantitative PCR (qPCR) data

S Pabinger, S Rödiger, A Kriegner, K Vierlinger… - Biomolecular Detection …, 2014 - Elsevier
Real-time quantitative polymerase-chain-reaction (qPCR) is a standard technique in most
laboratories used for various applications in basic research. Analysis of qPCR data is a …

Advancements in detection and removal of antibiotic resistance genes in sludge digestion: A state-of-art review

Z Zhang, X Li, H Liu, A Zamyadi, W Guo, H Wen… - Bioresource …, 2022 - Elsevier
Sludge from wastewater treatment plants can act as a repository and crucial environmental
provider of antibiotic resistance genes (ARGs). Over the past few years, people's knowledge …

Exact p-values for pairwise comparison of Friedman rank sums, with application to comparing classifiers

R Eisinga, T Heskes, B Pelzer, M Te Grotenhuis - BMC bioinformatics, 2017 - Springer
Abstract Background The Friedman rank sum test is a widely-used nonparametric method in
computational biology. In addition to examining the overall null hypothesis of no significant …

[HTML][HTML] Linalool attenuates oxidative stress and mitochondrial dysfunction mediated by glutamate and NMDA toxicity

AM Sabogal-Guáqueta, F Hobbie, A Keerthi… - Biomedicine & …, 2019 - Elsevier
Mitochondrial dysfunction and inflammation contribute to the initiation and development of
several brain pathological conditions, including Alzheimer's disease and cerebral ischemia …

[HTML][HTML] Amplification of nonspecific products in quantitative polymerase chain reactions (qPCR)

A Ruiz-Villalba, E van Pelt-Verkuil, QD Gunst… - Biomolecular detection …, 2017 - Elsevier
Quantitative PCR allows the precise measurement of DNA concentrations and is generally
considered to be straightforward and trouble free. However, a survey with 93 validated …

[HTML][HTML] Considerations and quality controls when analyzing cell-free tumor DNA

G Johansson, D Andersson, S Filges, J Li… - Biomolecular detection …, 2019 - Elsevier
Circulating cell-free tumor DNA (ctDNA) is a promising biomarker in cancer. Ultrasensitive
technologies enable detection of low (< 0.1%) mutant allele frequencies, a pre-requisite to …