SARS-CoV-2 and innate immunity: the good, the bad, and the “goldilocks”

BL Sievers, MTK Cheng, K Csiba, B Meng… - Cellular & Molecular …, 2024‏ - nature.com
An ancient conflict between hosts and pathogens has driven the innate and adaptive arms of
immunity. Knowledge about this interplay can not only help us identify biological …

A-to-I RNA editing—immune protector and transcriptome diversifier

E Eisenberg, EY Levanon - Nature Reviews Genetics, 2018‏ - nature.com
Modifications of RNA affect its function and stability. RNA editing is unique among these
modifications because it not only alters the cellular fate of RNA molecules but also alters …

Evidence for host-dependent RNA editing in the transcriptome of SARS-CoV-2

S Di Giorgio, F Martignano, MG Torcia, G Mattiuz… - Science …, 2020‏ - science.org
The COVID-19 outbreak has become a global health risk, and understanding the response
of the host to the SARS-CoV-2 virus will help to combat the disease. RNA editing by host …

Direct identification of A-to-I editing sites with nanopore native RNA sequencing

TA Nguyen, JWJ Heng, P Kaewsapsak, EPL Kok… - Nature …, 2022‏ - nature.com
Inosine is a prevalent RNA modification in animals and is formed when an adenosine is
deaminated by the ADAR family of enzymes. Traditionally, inosines are identified indirectly …

Gene regulation in the immune system by long noncoding RNAs

YG Chen, AT Satpathy, HY Chang - Nature immunology, 2017‏ - nature.com
Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression in
the immune system. Studies have shown that lncRNAs are expressed in a highly lineage …

The RNA modification landscape in human disease

N Jonkhout, J Tran, MA Smith, N Schonrock, JS Mattick… - Rna, 2017‏ - rnajournal.cshlp.org
RNA modifications have been historically considered as fine-tuning chemo-structural
features of infrastructural RNAs, such as rRNAs, tRNAs, and snoRNAs. This view has …

Dynamic landscape and regulation of RNA editing in mammals

MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler… - Nature, 2017‏ - nature.com
Abstract Adenosine-to-inosine (A-to-I) RNA editing is a conserved post-transcriptional
mechanism mediated by ADAR enzymes that diversifies the transcriptome by altering …

Landscape of adenosine-to-inosine RNA recoding across human tissues

O Gabay, Y Shoshan, E Kopel, U Ben-Zvi… - Nature …, 2022‏ - nature.com
RNA editing by adenosine deaminases changes the information encoded in the mRNA from
its genomic blueprint. Editing of protein-coding sequences can introduce novel, functionally …

ADAR1-mediated RNA editing of SCD1 drives drug resistance and self-renewal in gastric cancer

TL Wong, JJ Loh, S Lu, HHN Yan, HC Siu, R **… - Nature …, 2023‏ - nature.com
Targetable drivers governing 5-fluorouracil and cisplatin (5FU+ CDDP) resistance remain
elusive due to the paucity of physiologically and therapeutically relevant models. Here, we …

Novel insight into the regulatory roles of diverse RNA modifications: Re-defining the bridge between transcription and translation

H Shi, P Chai, R Jia, X Fan - Molecular cancer, 2020‏ - Springer
RNA modifications can be added or removed by a variety of enzymes that catalyse the
necessary reactions, and these modifications play roles in essential molecular mechanisms …