Pangenome indexes are promising tools for many applications, including classification of
nanopore sequencing reads. Move structure is a compressed-index data structure based on …

Centrifuger is an efficient taxonomic classification method that compares sequencing reads
against a microbial genome database. In Centrifuger, the Burrows-Wheeler transformed …

Taxonomic sequence classification is a computational problem central to the study of
metagenomics and evolution. Advances in compressed indexing with the r-index enable full …

Pangenomes are growing in number and size, thanks to the prevalence of high-quality long-
read assemblies. However, current methods for studying sequence composition and …

With DNA sequencing becoming a routine analysis, the amount of genomic data collected is
growing rapidly, having already reached the pace, only destined to grow, of more than 35 …