Molecular reactions at aqueous interfaces
MF Ruiz-Lopez, JS Francisco… - Nature Reviews …, 2020 - nature.com
This Review aims to critically analyse the emerging field of chemical reactivity at aqueous
interfaces. The subject has evolved rapidly since the discovery of the so-called 'on-water …
interfaces. The subject has evolved rapidly since the discovery of the so-called 'on-water …
Dielectric continuum methods for quantum chemistry
JM Herbert - Wiley Interdisciplinary Reviews: Computational …, 2021 - Wiley Online Library
This review describes the theory and implementation of implicit solvation models based on
continuum electrostatics. Within quantum chemistry this formalism is sometimes …
continuum electrostatics. Within quantum chemistry this formalism is sometimes …
Calculating the binding free energies of charged species based on explicit-solvent simulations employing lattice-sum methods: An accurate correction scheme for …
The calculation of a protein-ligand binding free energy based on molecular dynamics (MD)
simulations generally relies on a thermodynamic cycle in which the ligand is alchemically …
simulations generally relies on a thermodynamic cycle in which the ligand is alchemically …
Hybrid discrete‐continuum solvation methods
JR Pliego Jr, JM Riveros - Wiley Interdisciplinary Reviews …, 2020 - Wiley Online Library
Hybrid discrete‐continuum approaches for solvation have been widely applied for diverse
problems in chemistry suck as pKa calculation in aqueous and nonaqueous solvents …
problems in chemistry suck as pKa calculation in aqueous and nonaqueous solvents …
Uncovering differences in hydration free energies and structures for model compound mimics of charged side chains of amino acids
Free energies of hydration are of fundamental interest for modeling and understanding
conformational and phase equilibria of macromolecular solutes in aqueous phases. Of …
conformational and phase equilibria of macromolecular solutes in aqueous phases. Of …
Mechanism of ion adsorption to aqueous interfaces: Graphene/water vs. air/water
The adsorption of ions to aqueous interfaces is a phenomenon that profoundly influences
vital processes in many areas of science, including biology, atmospheric chemistry …
vital processes in many areas of science, including biology, atmospheric chemistry …
Absolute proton hydration free energy, surface potential of water, and redox potential of the hydrogen electrode from first principles: QM/MM MD free-energy …
TS Hofer, PH Hünenberger - The Journal of chemical physics, 2018 - pubs.aip.org
Absolute proton hydration free energy, surface potential of water, and redox potential of the
hydrogen electrode from first principles: QM/MM MD free-energy simulations of sodium and …
hydrogen electrode from first principles: QM/MM MD free-energy simulations of sodium and …
An overview of electrostatic free energy computations for solutions and proteins
YL Lin, A Aleksandrov, T Simonson… - Journal of chemical …, 2014 - ACS Publications
Free energy simulations for electrostatic and charging processes in complex molecular
systems encounter specific difficulties owing to the long-range, 1/r Coulomb interaction. To …
systems encounter specific difficulties owing to the long-range, 1/r Coulomb interaction. To …
Cation–ligand interactions dictate salt partitioning and diffusivity in ligand-functionalized polymer membranes
Membranes are an attractive alternative to current thermal separations due to their
scalability and energy efficiency in desalinating water. Unfortunately, many of the …
scalability and energy efficiency in desalinating water. Unfortunately, many of the …
Machine learning-guided approach for studying solvation environments
Y Basdogan, MC Groenenboom… - Journal of chemical …, 2019 - ACS Publications
Molecular-level understanding and characterization of solvation environments are often
needed across chemistry, biology, and engineering. Toward practical modeling of local …
needed across chemistry, biology, and engineering. Toward practical modeling of local …