Metabolite–enzyme coevolution: from single enzymes to metabolic pathways and networks
How individual enzymes evolved is relatively well understood. However, individual enzymes
rarely confer a physiological advantage on their own. Judging by its current state, the …
rarely confer a physiological advantage on their own. Judging by its current state, the …
The limits of enzyme specificity and the evolution of metabolism
A Peracchi - Trends in biochemical sciences, 2018 - cell.com
The substrate specificity of enzymes is bound to be imperfect, because of unavoidable
physicochemical limits. In extant metabolic enzymes, furthermore, such limits are seldom …
physicochemical limits. In extant metabolic enzymes, furthermore, such limits are seldom …
How enzyme promiscuity and horizontal gene transfer contribute to metabolic innovation
ME Glasner, DP Truong, BC Morse - The FEBS journal, 2020 - Wiley Online Library
Promiscuity is the coincidental ability of an enzyme to catalyze its native reaction and
additional reactions that are not biological functions in the same active site. Promiscuity …
additional reactions that are not biological functions in the same active site. Promiscuity …
Biochemical and structural elucidation of the L-carnitine degradation pathway of the human pathogen Acinetobacter baumannii
F Piskol, P Lukat, L Kaufhold, A Heger… - Frontiers in …, 2024 - frontiersin.org
Acinetobacter baumannii is an opportunistic human pathogen which can use host-derived L-
carnitine as sole carbon and energy source. Recently, an L-carnitine transporter (Aci1347) …
carnitine as sole carbon and energy source. Recently, an L-carnitine transporter (Aci1347) …
Bi-allelic CLPB mutations cause cataract, renal cysts, nephrocalcinosis and 3-methylglutaconic aciduria, a novel disorder of mitochondrial protein disaggregation
M Kanabus, R Shahni, JW Saldanha, E Murphy… - Journal of inherited …, 2015 - Springer
Whole exome sequencing was used to investigate the genetic cause of mitochondrial
disease in two siblings with a syndrome of congenital lamellar cataracts associated with …
disease in two siblings with a syndrome of congenital lamellar cataracts associated with …
Uncovering a superfamily of nickel-dependent hydroxyacid racemases and epimerases
Isomerization reactions are fundamental in biology. Lactate racemase, which isomerizes L-
and D-lactate, is composed of the LarA protein and a nickel-containing cofactor, the nickel …
and D-lactate, is composed of the LarA protein and a nickel-containing cofactor, the nickel …
Harnessing underground metabolism for pathway development
J Rosenberg, FM Commichau - Trends in biotechnology, 2019 - cell.com
Fermentative production of valuable substances is an economically competitive and
ecologically sustainable alternative to chemical synthesis, but it is often hampered by …
ecologically sustainable alternative to chemical synthesis, but it is often hampered by …
Exploiting enzyme promiscuity to shape plant specialized metabolism
W Kreis, J Munkert - Journal of experimental botany, 2019 - academic.oup.com
The amazing variability of plant metabolism and its rapid divergence during evolution pose
fundamental questions as to the driving forces, mechanisms, and players in metabolic …
fundamental questions as to the driving forces, mechanisms, and players in metabolic …
The carnitine degradation pathway of Acinetobacter baumannii and its role in virulence
J Breisch, C Schumm, A Poehlein… - Environmental …, 2022 - Wiley Online Library
The opportunistic human pathogen Acinetobacter baumannii can grow with carnitine but its
metabolism, regulation and role in virulence remained elusive. Recently, we identified a …
metabolism, regulation and role in virulence remained elusive. Recently, we identified a …
Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset
The recruitment and evolutionary optimization of promiscuous enzymes is key to the rapid
adaptation of organisms to changing environments. Our understanding of the precise …
adaptation of organisms to changing environments. Our understanding of the precise …