Function of alternative splicing
Almost all polymerase II transcripts undergo alternative pre-mRNA splicing. Here, we review
the functions of alternative splicing events that have been experimentally determined. The …
the functions of alternative splicing events that have been experimentally determined. The …
Origin and evolution of spliceosomal introns
Evolution of exon-intron structure of eukaryotic genes has been a matter of long-standing,
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …
intensive debate. The introns-early concept, later rebranded 'introns first'held that protein …
The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding
S Cesari, G Thilliez, C Ribot, V Chalvon, C Michel… - The Plant …, 2013 - academic.oup.com
Resistance (R) proteins recognize pathogen avirulence (Avr) proteins by direct or indirect
binding and are multidomain proteins generally carrying a nucleotide binding (NB) and a …
binding and are multidomain proteins generally carrying a nucleotide binding (NB) and a …
APPRIS: annotation of principal and alternative splice isoforms
Here, we present APPRIS (http://appris. bioinfo. cnio. es), a database that houses
annotations of human splice isoforms. APPRIS has been designed to provide value to …
annotations of human splice isoforms. APPRIS has been designed to provide value to …
Do not panic: An intron-centric guide to alternative splicing
E Petrillo - The Plant Cell, 2023 - academic.oup.com
This review is an attempt to establish concepts of splicing and alternative splicing giving
proper relevance to introns, the key actors in this mechanism. It might also work as a guide …
proper relevance to introns, the key actors in this mechanism. It might also work as a guide …
Transfer and functional consequences of dietary microRNAs in vertebrates: concepts in search of corroboration: negative results challenge the hypothesis that dietary …
If validated, diet‐derived foreign microRNA absorption and function in consuming
vertebrates would drastically alter our understanding of nutrition and ecology. RNA …
vertebrates would drastically alter our understanding of nutrition and ecology. RNA …
Discovery and mass spectrometric analysis of novel splice-junction peptides using RNA-Seq
Human proteomic databases required for MS peptide identification are frequently updated
and carefully curated, yet are still incomplete because it has been challenging to acquire …
and carefully curated, yet are still incomplete because it has been challenging to acquire …
Principles and correction of 5'-splice site selection
In Eukarya, immature mRNA transcripts (pre-mRNA) often contain coding sequences, or
exons, interleaved by non-coding sequences, or introns. Introns are removed upon splicing …
exons, interleaved by non-coding sequences, or introns. Introns are removed upon splicing …
Glycosylphosphatidylinositol-Anchored Proteins in Arabidopsis and One of Their Common Roles in Signaling Transduction
K Zhou - Frontiers in Plant Science, 2019 - frontiersin.org
Diverse proteins are found modified with glycosylphosphatidylinositol (GPI) at their carboxyl
terminus in eukaryotes, which allows them to associate with membrane lipid bilayers and …
terminus in eukaryotes, which allows them to associate with membrane lipid bilayers and …
Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data
Integrating large-scale functional genomic data has significantly accelerated our
understanding of gene functions. However, no algorithm has been developed to differentiate …
understanding of gene functions. However, no algorithm has been developed to differentiate …