Review on the QM/MM methodologies and their application to metalloproteins

CE Tzeliou, MA Mermigki, D Tzeli - Molecules, 2022 - mdpi.com
The multiscaling quantum mechanics/molecular mechanics (QM/MM) approach was
introduced in 1976, while the extensive acceptance of this methodology started in the 1990s …

N-heterocyclic carbenes as bridgehead donors in metal pincer complexes

F He, KP Zois, D Tzeli, AA Danopoulos… - Coordination Chemistry …, 2024 - Elsevier
Rigid terdentate 'pincer'ligands containing a bridgehead N-heterocyclic carbene (NHC)
donor attract considerable interest as spectators in transition metal complexes with broad …

Say no to optimization: A nonorthogonal quantum eigensolver

U Baek, D Hait, J Shee, O Leimkuhler, WJ Huggins… - PRX Quantum, 2023 - APS
A balanced description of both static and dynamic correlations in electronic systems with
nearly degenerate low-lying states presents a challenge for multiconfigurational methods on …

Importance of Electron Correlation on the Geometry and Electronic Structure of [2Fe–2S] Systems: A Benchmark Study of the [Fe2S2 (SCH3) 4] 2–, 3–, 4–,[Fe2S2 …

D Tzeli, P Golub, J Brabec, M Matoušek… - Journal of Chemical …, 2024 - ACS Publications
Iron–sulfur clusters are crucial for biological electron transport and catalysis. Obtaining
accurate geometries, energetics, manifolds of their excited electronic states, and reduction …

Density matrix renormalization group with dynamical correlation via adiabatic connection

P Beran, M Matoušek, M Hapka… - Journal of Chemical …, 2021 - ACS Publications
The quantum chemical version of the density matrix renormalization group (DMRG) method
has established itself as one of the methods of choice for calculations of strongly correlated …

Quasilocal entanglement across the Mott-Hubbard transition

G Bellomia, C Mejuto-Zaera, M Capone, A Amaricci - Physical Review B, 2024 - APS
The possibility to directly measure, in a cold-atom quantum simulator, the von Neumann
entropy and mutual information between a site and its environment opens new perspectives …

Dynamic Correlation on the Adaptive Sampling Configuration Interaction (ASCI) Reference Function: ASCI-DSRG-MRPT2

JW Park - Journal of Chemical Theory and Computation, 2023 - ACS Publications
A balanced description of static and dynamic electron correlations is at the heart of quantum
chemical methods. To obtain accurate results in strongly correlated systems using wave …

[4Fe–4S]-Mediated Proton-Coupled Electron Transfer Enables the Efficient Degradation of Chloroalkenes by Reductive Dehalogenases

X Zhang, Z Wang, Z Li, S Shaik, B Wang - ACS Catalysis, 2023 - ACS Publications
Reductive dehalogenases (RDases) are key enzymes involved in the degradation of
organohalide compounds. Despite extensive experimental and computational studies, the …

Characterization of the Geometrical and Electronic Structures of the Active Site and Its Effects on the Surrounding Environment in Reduced High-Potential Iron–Sulfur …

A Sato, Y Hori, Y Shigeta - Inorganic Chemistry, 2023 - ACS Publications
The high-potential iron–sulfur protein (HiPIP) is an electron-transporting protein that
functions in the photosynthetic electron-transfer system and possesses a cubane-type [4Fe …

Chelate Complexes of 3d Transition Metal Ions─ A Challenge for Electronic-Structure Methods?

L Hehn, P Deglmann, M Kühn - Journal of Chemical Theory and …, 2024 - ACS Publications
Different electronic-structure methods were assessed for their ability to predict two important
properties of the industrially relevant chelating agent nitrilotriacetic acid (NTA): its selectivity …