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A review of feature selection and feature extraction methods applied on microarray data
ZM Hira, DF Gillies - Advances in bioinformatics, 2015 - Wiley Online Library
We summarise various ways of performing dimensionality reduction on high‐dimensional
microarray data. Many different feature selection and feature extraction methods exist and …
microarray data. Many different feature selection and feature extraction methods exist and …
Gene reduction and machine learning algorithms for cancer classification based on microarray gene expression data: A comprehensive review
Disease diagnosis and prediction methods in biotechnology and medicine have significantly
advanced over time. Consequently, analyzing raw gene expression is crucial for identifying …
advanced over time. Consequently, analyzing raw gene expression is crucial for identifying …
Interpretation of T cell states from single-cell transcriptomics data using reference atlases
Single-cell RNA sequencing (scRNA-seq) has revealed an unprecedented degree of
immune cell diversity. However, consistent definition of cell subtypes and cell states across …
immune cell diversity. However, consistent definition of cell subtypes and cell states across …
The Escherichia coli transcriptome mostly consists of independently regulated modules
AV Sastry, Y Gao, R Szubin, Y Hefner, S Xu… - Nature …, 2019 - nature.com
Underlying cellular responses is a transcriptional regulatory network (TRN) that modulates
gene expression. A useful description of the TRN would decompose the transcriptome into …
gene expression. A useful description of the TRN would decompose the transcriptome into …
[HTML][HTML] Enter the matrix: factorization uncovers knowledge from omics
Omics data contain signals from the molecular, physical, and kinetic inter-and intracellular
interactions that control biological systems. Matrix factorization (MF) techniques can reveal …
interactions that control biological systems. Matrix factorization (MF) techniques can reveal …
Principles and methods of integrative genomic analyses in cancer
VN Kristensen, OC Lingjærde, HG Russnes… - Nature Reviews …, 2014 - nature.com
Combined analyses of molecular data, such as DNA copy-number alteration, mRNA and
protein expression, point to biological functions and molecular pathways being deregulated …
protein expression, point to biological functions and molecular pathways being deregulated …
Human induced pluripotent stem cell–derived cardiomyocytes recapitulate the predilection of breast cancer patients to doxorubicin-induced cardiotoxicity
Doxorubicin is an anthracycline chemotherapy agent effective in treating a wide range of
malignancies, but it causes a dose-related cardiotoxicity that can lead to heart failure in a …
malignancies, but it causes a dose-related cardiotoxicity that can lead to heart failure in a …
Knowledge discovery in medicine: Current issue and future trend
N Esfandiari, MR Babavalian, AME Moghadam… - Expert Systems with …, 2014 - Elsevier
Data mining is a powerful method to extract knowledge from data. Raw data faces various
challenges that make traditional method improper for knowledge extraction. Data mining is …
challenges that make traditional method improper for knowledge extraction. Data mining is …
[HTML][HTML] Detection of mental stress through EEG signal in virtual reality environment
This paper investigates the use of an electroencephalogram (EEG) signal to classify a
subject's stress level while using virtual reality (VR). For this purpose, we designed an …
subject's stress level while using virtual reality (VR). For this purpose, we designed an …
Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease
Background Pouchitis is common after ileal pouch-anal anastomosis (IPAA) surgery for
ulcerative colitis (UC). Similar to inflammatory bowel disease (IBD), both host genetics and …
ulcerative colitis (UC). Similar to inflammatory bowel disease (IBD), both host genetics and …