Next-generation sequencing transforms today's biology
SC Schuster - Nature methods, 2008 - nature.com
A new generation of non-Sanger-based sequencing technologies has delivered on its
promise of sequencing DNA at unprecedented speed, thereby enabling impressive scientific …
promise of sequencing DNA at unprecedented speed, thereby enabling impressive scientific …
[PDF][PDF] Applications of next-generation sequencing technologies in functional genomics
Applications of next-generation sequencing technologies in functional genomics Page 1
Review Applications of next-generation sequencing technologies in functional genomics Olena …
Review Applications of next-generation sequencing technologies in functional genomics Olena …
The developmental dynamics of the maize leaf transcriptome
We have analyzed the maize leaf transcriptome using Illumina sequencing. We mapped
more than 120 million reads to define gene structure and alternative splicing events and to …
more than 120 million reads to define gene structure and alternative splicing events and to …
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content
Following the domestication of maize over the past∼ 10,000 years, breeders have exploited
the extensive genetic diversity of this species to mold its phenotype to meet human needs …
the extensive genetic diversity of this species to mold its phenotype to meet human needs …
How a retrotransposon exploits the plant's heat stress response for its activation
VV Cavrak, N Lettner, S Jamge, A Kosarewicz… - PLoS …, 2014 - journals.plos.org
Retrotransposons are major components of plant and animal genomes. They amplify by
reverse transcription and reintegration into the host genome but their activity is usually …
reverse transcription and reintegration into the host genome but their activity is usually …
High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
Background Benefits from high-throughput sequencing using 454 pyrosequencing
technology may be most apparent for species with high societal or economic value but few …
technology may be most apparent for species with high societal or economic value but few …
Epigenetic regulation during plant development and the capacity for epigenetic memory
EA Hemenway, M Gehring - Annual review of plant biology, 2023 - annualreviews.org
The establishment, maintenance, and removal of epigenetic modifications provide an
additional layer of regulation, beyond genetically encoded factors, by which plants can …
additional layer of regulation, beyond genetically encoded factors, by which plants can …
[HTML][HTML] Twenty years on: the inner workings of the shoot apical meristem, a developmental dynamo
MK Barton - Developmental biology, 2010 - Elsevier
The shoot apical meristem of angiosperm plants generates leaf, stem and floral structures
throughout the plant's lifetime. To do this, the plant must maintain a population of stem cells …
throughout the plant's lifetime. To do this, the plant must maintain a population of stem cells …
Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population
Cytosine DNA methylation is one avenue for passing information through cell divisions.
Here, we present epigenomic analyses of soybean recombinant inbred lines (RILs) and their …
Here, we present epigenomic analyses of soybean recombinant inbred lines (RILs) and their …
LTR retrotransposons, handy hitchhikers of plant regulation and stress response
MA Grandbastien - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2015 - Elsevier
LTR retrotransposons are major components of plant genomes. They are regulated by a
diverse array of external stresses and tissue culture conditions, displaying finely tuned …
diverse array of external stresses and tissue culture conditions, displaying finely tuned …