A plea for standardized nuclear markers in metazoan DNA taxonomy

J Eberle, D Ahrens, C Mayer, O Niehuis… - Trends in Ecology & …, 2020 - cell.com
The ease of sequencing DNA barcodes promoted a species identification system universally
applicable across animal phyla. However, relying on a single mitochondrial DNA fragment …

The multispecies coalescent over-splits species in the case of geographically widespread taxa

EA Chambers, DM Hillis - Systematic Biology, 2020 - academic.oup.com
Many recent species delimitation studies rely exclusively on limited analyses of genetic data
analyzed under the multispecies coalescent (MSC) model, and results from these studies …

Standardized nuclear markers improve and homogenize species delimitation in Metazoa

L Dietz, J Eberle, C Mayer, S Kukowka… - Methods in Ecology …, 2023 - Wiley Online Library
Species are the fundamental units of life and evolution. Their recognition is essential for
science and society. Molecular methods have been increasingly used for the identification of …

Is it time to describe new species without diagnoses?—A comment on Sharkey et al. (2021)

D Ahrens, ST Ahyong, A Ballerio, MVL Barclay… - Zootaxa, 2021 - biotaxa.org
New methods in taxonomy and systematics can influence the overall practice of formally
naming and describing biodiversity. DNA barcoding has been controversial since its …

Multiple species delimitation approaches with COI barcodes poorly fit each other and morphospecies – An integrative taxonomy case of Sri Lankan Sericini chafers …

UGSL Ranasinghe, J Eberle, J Thormann… - Ecology and …, 2022 - Wiley Online Library
DNA taxonomy including barcoding and metabarcoding is widely used to explore the
diversity in biodiversity hotspots. In most of these hotspot areas, chafers are represented by …

The evolution of anti-bat sensory illusions in moths

JJ Rubin, CA Hamilton, CJW McClure, BA Chadwell… - Science …, 2018 - science.org
Prey transmit sensory illusions to redirect predatory strikes, creating a discrepancy between
what a predator perceives and reality. We use the acoustic arms race between bats and …

Different species or genetically divergent populations? Integrative species delimitation of the Primulina hochiensis complex from isolated karst habitats

L Yang, H Kong, JP Huang, M Kang - Molecular Phylogenetics and …, 2019 - Elsevier
To consistently and objectively delineate species-level divergence from population
subdivision has been a challenge in systematics. This is particularly evident in naturally …

DNA barcoding in species delimitation: from genetic distances to integrative taxonomy

A Miralles, N Puillandre, M Vences - DNA Barcoding: Methods and …, 2024 - Springer
Over the past two decades, DNA barcoding has become the most popular exploration
approach in molecular taxonomy, whether for identification, discovery, delimitation, or …

Shedding light on species boundaries in small endogeic animals through an integrative approach: species delimitation in the centipede Clinopodes carinthiacus …

E Peretti, C Cecchin, G Fusco… - Zoological Journal of …, 2022 - academic.oup.com
The investigation of species boundaries in strictly endogeic animals is challenging because
they are prone to fine-scale genetic and phenotypic geographical differentiation owing to …

Integrating genomic and phenotypic data to evaluate alternative phylogenetic and species delimitation hypotheses in a recent evolutionary radiation of grasshoppers

V Noguerales, PJ Cordero, J Ortego - Molecular Ecology, 2018 - Wiley Online Library
Although resolving phylogenetic relationships and establishing species limits are primary
goals of systematics, these tasks remain challenging at both conceptual and analytical …