Genetic circuit design automation with Cello 2.0

TS Jones, SMD Oliveira, CJ Myers, CA Voigt… - Nature protocols, 2022 - nature.com
Cells interact with their environment, communicate among themselves, track time and make
decisions through functions controlled by natural regulatory genetic circuits consisting of …

Customizing cellular signal processing by synthetic multi-level regulatory circuits

Y Gao, L Wang, B Wang - Nature Communications, 2023 - nature.com
As synthetic biology permeates society, the signal processing circuits in engineered living
systems must be customized to meet practical demands. Towards this mission, novel …

Self-tunable engineered yeast probiotics for the treatment of inflammatory bowel disease

BM Scott, C Gutierrez-Vazquez, LM Sanmarco… - Nature medicine, 2021 - nature.com
Inflammatory bowel disease (IBD) is a complex chronic inflammatory disorder of the
gastrointestinal tract. Extracellular adenosine triphosphate (eATP) produced by the …

Overlap** genes in natural and engineered genomes

BW Wright, MP Molloy, PR Jaschke - Nature Reviews Genetics, 2022 - nature.com
Modern genome-scale methods that identify new genes, such as proteogenomics and
ribosome profiling, have revealed, to the surprise of many, that overlap in genes, open …

Engineering consortia by polymeric microbial swarmbots

L Wang, X Zhang, C Tang, P Li, R Zhu, J Sun… - Nature …, 2022 - nature.com
Synthetic microbial consortia represent a new frontier for synthetic biology given that they
can solve more complex problems than monocultures. However, most attempts to co …

CRISPRi-based circuits to control gene expression in plants

MA Khan, G Herring, JY Zhu, M Oliva, E Fourie… - Nature …, 2024 - nature.com
The construction of synthetic gene circuits in plants has been limited by a lack of orthogonal
and modular parts. Here, we implement a CRISPR (clustered regularly interspaced short …

[HTML][HTML] Genetic requirements for cell division in a genomically minimal cell

JF Pelletier, L Sun, KS Wise, N Assad-Garcia, BJ Karas… - Cell, 2021 - cell.com
Genomically minimal cells, such as JCVI-syn3. 0, offer a platform to clarify genes underlying
core physiological processes. Although this minimal cell includes genes essential for …

Synthetic biology for plant genetic engineering and molecular farming

Y Wang, GS Demirer - Trends in Biotechnology, 2023 - cell.com
Many efforts have been put into engineering plants to improve crop yields and stress
tolerance and boost the bioproduction of valuable molecules. Yet, our capabilities are still …

Enabling technology and core theory of synthetic biology

XE Zhang, C Liu, J Dai, Y Yuan, C Gao, Y Feng… - Science China Life …, 2023 - Springer
Synthetic biology provides a new paradigm for life science research (“build to learn”) and
opens the future journey of biotechnology (“build to use”). Here, we discuss advances of …

Plant cell cultures as heterologous bio-factories for secondary metabolite production

T Wu, SM Kerbler, AR Fernie, Y Zhang - Plant Communications, 2021 - cell.com
Synthetic biology has been develo** rapidly in the last decade and is attracting increasing
attention from many plant biologists. The production of high-value plant-specific secondary …